Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 LINC01815-202ENST00000641468 1409 ntBASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CNKSR3Q6P9H4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CNKSR3Q6P9H4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CNKSR3Q6P9H4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CNKSR3Q6P9H4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
CNKSR3Q6P9H4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CNKSR3Q6P9H4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CNKSR3Q6P9H4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 C18orf15-201ENST00000623680 2534 ntBASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 ALG1L13P-202ENST00000519320 584 ntBASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 CR383656.3-201ENST00000551315 183 ntBASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 AC027237.1-201ENST00000560942 655 ntBASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 AC124068.2-201ENST00000569473 1109 ntBASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 AC112693.3-201ENST00000624819 1983 ntBASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNKSR3Q6P9H4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 AC092135.3-201ENST00000624151 1846 ntBASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 AC026471.1-201ENST00000564629 3026 ntBASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 AL391005.1-201ENST00000623953 2435 ntBASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 KRT8P1-201ENST00000557533 1207 ntBASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 AP000322.3-201ENST00000608665 388 ntBASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms