Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC19.03■□□□□ 0.64
VPS72Q15906 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VPS72Q15906 AL353622.2-201ENST00000605846 425 ntBASIC19.03■□□□□ 0.64
VPS72Q15906 AL021707.6-201ENST00000609212 491 ntBASIC19.03■□□□□ 0.64
VPS72Q15906 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS72Q15906 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS72Q15906 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS72Q15906 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
VPS72Q15906 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
VPS72Q15906 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VPS72Q15906 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS72Q15906 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
VPS72Q15906 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS72Q15906 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS72Q15906 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS72Q15906 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS72Q15906 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS72Q15906 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VPS72Q15906 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
VPS72Q15906 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
VPS72Q15906 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
VPS72Q15906 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC19.02■□□□□ 0.64
VPS72Q15906 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS72Q15906 AC092135.3-201ENST00000624151 1846 ntBASIC19.02■□□□□ 0.64
VPS72Q15906 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS72Q15906 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS72Q15906 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
VPS72Q15906 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC19.02■□□□□ 0.64
VPS72Q15906 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.02■□□□□ 0.64
VPS72Q15906 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS72Q15906 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
VPS72Q15906 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS72Q15906 LINC00265-2P-201ENST00000413372 782 ntBASIC19.02■□□□□ 0.64
VPS72Q15906 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS72Q15906 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC19.02■□□□□ 0.64
VPS72Q15906 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS72Q15906 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC19.02■□□□□ 0.64
VPS72Q15906 CTBP2P6-201ENST00000526402 1229 ntBASIC19.02■□□□□ 0.64
VPS72Q15906 DLK1-205ENST00000556051 469 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS72Q15906 SKA2-205ENST00000580541 689 ntTSL 3 BASIC19.02■□□□□ 0.64
VPS72Q15906 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS72Q15906 AC091769.1-201ENST00000619576 568 ntBASIC19.02■□□□□ 0.64
VPS72Q15906 RARS-210ENST00000626454 177 ntTSL 5 BASIC19.02■□□□□ 0.64
VPS72Q15906 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS72Q15906 AC019109.1-201ENST00000401725 1874 ntBASIC19.02■□□□□ 0.64
VPS72Q15906 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS72Q15906 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS72Q15906 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS72Q15906 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS72Q15906 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
VPS72Q15906 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.02■□□□□ 0.63
VPS72Q15906 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
VPS72Q15906 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
VPS72Q15906 AC008536.3-201ENST00000623282 1599 ntBASIC19.02■□□□□ 0.63
VPS72Q15906 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS72Q15906 AC067931.2-201ENST00000623655 2003 ntBASIC19.01■□□□□ 0.63
VPS72Q15906 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
VPS72Q15906 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
VPS72Q15906 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
VPS72Q15906 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
VPS72Q15906 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
VPS72Q15906 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS72Q15906 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS72Q15906 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC19.01■□□□□ 0.63
VPS72Q15906 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS72Q15906 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC19.01■□□□□ 0.63
VPS72Q15906 AC010900.1-201ENST00000449849 1296 ntBASIC19.01■□□□□ 0.63
VPS72Q15906 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS72Q15906 RN7SL788P-201ENST00000460504 316 ntBASIC19.01■□□□□ 0.63
VPS72Q15906 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC19.01■□□□□ 0.63
VPS72Q15906 AC087203.1-201ENST00000532111 1181 ntBASIC19.01■□□□□ 0.63
VPS72Q15906 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS72Q15906 CES1P2-201ENST00000566467 1242 ntBASIC19.01■□□□□ 0.63
VPS72Q15906 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC19.01■□□□□ 0.63
VPS72Q15906 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
VPS72Q15906 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC19.01■□□□□ 0.63
VPS72Q15906 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.01■□□□□ 0.63
VPS72Q15906 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS72Q15906 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS72Q15906 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS72Q15906 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
VPS72Q15906 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms