Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP1Q04837 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP1Q04837 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP1Q04837 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP1Q04837 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SSBP1Q04837 CICP16-201ENST00000502609 2813 ntBASIC12.68□□□□□ -0.38
SSBP1Q04837 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP1Q04837 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP1Q04837 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SSBP1Q04837 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP1Q04837 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SSBP1Q04837 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP1Q04837 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP1Q04837 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SSBP1Q04837 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP1Q04837 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SSBP1Q04837 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP1Q04837 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SSBP1Q04837 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
SSBP1Q04837 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.67□□□□□ -0.38
SSBP1Q04837 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP1Q04837 AC007967.2-201ENST00000432613 625 ntBASIC12.67□□□□□ -0.38
SSBP1Q04837 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.67□□□□□ -0.38
SSBP1Q04837 FAM58CP-201ENST00000435741 640 ntBASIC12.67□□□□□ -0.38
SSBP1Q04837 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.67□□□□□ -0.38
SSBP1Q04837 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 FAAHP1-202ENST00000446499 1238 ntBASIC12.67□□□□□ -0.38
SSBP1Q04837 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.67□□□□□ -0.38
SSBP1Q04837 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.67□□□□□ -0.38
SSBP1Q04837 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.67□□□□□ -0.38
SSBP1Q04837 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 AC069335.1-201ENST00000489972 472 ntBASIC12.67□□□□□ -0.38
SSBP1Q04837 ALG1L8P-201ENST00000533887 760 ntBASIC12.67□□□□□ -0.38
SSBP1Q04837 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.67□□□□□ -0.38
SSBP1Q04837 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP1Q04837 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.67□□□□□ -0.38
SSBP1Q04837 AC012313.10-201ENST00000623509 926 ntBASIC12.67□□□□□ -0.38
SSBP1Q04837 LINC00628-201ENST00000628516 1289 ntBASIC12.67□□□□□ -0.38
SSBP1Q04837 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP1Q04837 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP1Q04837 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SSBP1Q04837 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 PEG13-201ENST00000631594 5667 ntBASIC12.67□□□□□ -0.38
SSBP1Q04837 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.67□□□□□ -0.38
SSBP1Q04837 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SSBP1Q04837 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP1Q04837 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP1Q04837 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP1Q04837 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SSBP1Q04837 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.66□□□□□ -0.38
SSBP1Q04837 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.66□□□□□ -0.38
SSBP1Q04837 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.66□□□□□ -0.38
SSBP1Q04837 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 AC093525.8-201ENST00000624099 1342 ntBASIC12.66□□□□□ -0.38
SSBP1Q04837 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 AC111170.3-201ENST00000624282 2464 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms