Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.15□□□□□ -0.14
RAE1P78406 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.15□□□□□ -0.14
RAE1P78406 AC025048.6-201ENST00000634326 1161 ntBASIC14.15□□□□□ -0.14
RAE1P78406 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.15□□□□□ -0.14
RAE1P78406 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.15□□□□□ -0.14
RAE1P78406 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAE1P78406 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAE1P78406 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAE1P78406 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.15□□□□□ -0.14
RAE1P78406 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.15□□□□□ -0.14
RAE1P78406 AC015688.4-201ENST00000580780 1647 ntBASIC14.15□□□□□ -0.14
RAE1P78406 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RAE1P78406 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAE1P78406 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RAE1P78406 FKBP4P6-201ENST00000457486 1332 ntBASIC14.15□□□□□ -0.15
RAE1P78406 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.15□□□□□ -0.15
RAE1P78406 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 AC009093.2-202ENST00000620513 2079 ntBASIC14.14□□□□□ -0.15
RAE1P78406 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.14□□□□□ -0.15
RAE1P78406 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
RAE1P78406 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.14□□□□□ -0.15
RAE1P78406 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 RN7SL832P-201ENST00000607781 1756 ntBASIC14.14□□□□□ -0.15
RAE1P78406 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RAE1P78406 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RAE1P78406 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 AC215219.1-201ENST00000400706 1817 ntBASIC14.14□□□□□ -0.15
RAE1P78406 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.14□□□□□ -0.15
RAE1P78406 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.14□□□□□ -0.15
RAE1P78406 FTLP10-202ENST00000505798 471 ntBASIC14.14□□□□□ -0.15
RAE1P78406 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
RAE1P78406 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.14□□□□□ -0.15
RAE1P78406 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RAE1P78406 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.14□□□□□ -0.15
RAE1P78406 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.14□□□□□ -0.15
RAE1P78406 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RAE1P78406 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RAE1P78406 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.14□□□□□ -0.15
RAE1P78406 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RAE1P78406 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAE1P78406 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RAE1P78406 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
RAE1P78406 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.13□□□□□ -0.15
RAE1P78406 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAE1P78406 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAE1P78406 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RAE1P78406 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.13□□□□□ -0.15
RAE1P78406 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RAE1P78406 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
RAE1P78406 AC098614.1-201ENST00000368528 745 ntBASIC14.13□□□□□ -0.15
RAE1P78406 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.13□□□□□ -0.15
RAE1P78406 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.13□□□□□ -0.15
RAE1P78406 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAE1P78406 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.13□□□□□ -0.15
RAE1P78406 RN7SL752P-201ENST00000463779 287 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms