Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.8□□□□□ -0.04
SRP54P61011 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.8□□□□□ -0.04
SRP54P61011 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.8□□□□□ -0.04
SRP54P61011 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SRP54P61011 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SRP54P61011 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SRP54P61011 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
SRP54P61011 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.8□□□□□ -0.04
SRP54P61011 CHMP1AP1-201ENST00000445563 662 ntBASIC14.8□□□□□ -0.04
SRP54P61011 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.8□□□□□ -0.04
SRP54P61011 HIST2H2BB-201ENST00000449108 381 ntBASIC14.8□□□□□ -0.04
SRP54P61011 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.8□□□□□ -0.04
SRP54P61011 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.8□□□□□ -0.04
SRP54P61011 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.8□□□□□ -0.04
SRP54P61011 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.8□□□□□ -0.04
SRP54P61011 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 LILRP1-201ENST00000444199 1370 ntBASIC14.8□□□□□ -0.04
SRP54P61011 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.8□□□□□ -0.04
SRP54P61011 AP000593.2-201ENST00000542775 1433 ntBASIC14.8□□□□□ -0.04
SRP54P61011 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.8□□□□□ -0.04
SRP54P61011 AC104581.4-201ENST00000623126 3052 ntBASIC14.8□□□□□ -0.04
SRP54P61011 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
SRP54P61011 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.8□□□□□ -0.04
SRP54P61011 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.8□□□□□ -0.04
SRP54P61011 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 AP000845.1-201ENST00000581677 2131 ntBASIC14.8□□□□□ -0.04
SRP54P61011 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRP54P61011 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.8□□□□□ -0.04
SRP54P61011 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
SRP54P61011 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SRP54P61011 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP54P61011 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.79□□□□□ -0.04
SRP54P61011 AC004945.1-201ENST00000416738 983 ntBASIC14.79□□□□□ -0.04
SRP54P61011 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.79□□□□□ -0.04
SRP54P61011 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.79□□□□□ -0.04
SRP54P61011 POM121L10P-201ENST00000436994 1285 ntBASIC14.79□□□□□ -0.04
SRP54P61011 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.79□□□□□ -0.04
SRP54P61011 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP54P61011 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SRP54P61011 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.79□□□□□ -0.04
SRP54P61011 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.79□□□□□ -0.04
SRP54P61011 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.79□□□□□ -0.04
SRP54P61011 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.79□□□□□ -0.04
SRP54P61011 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
SRP54P61011 AP001002.3-201ENST00000623482 206 ntBASIC14.79□□□□□ -0.04
SRP54P61011 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
SRP54P61011 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP54P61011 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRP54P61011 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SRP54P61011 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SRP54P61011 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.78□□□□□ -0.04
SRP54P61011 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.78□□□□□ -0.04
SRP54P61011 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SRP54P61011 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SRP54P61011 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.78□□□□□ -0.04
SRP54P61011 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.78□□□□□ -0.04
SRP54P61011 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms