Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 ALG3P1-201ENST00000508806 1114 ntBASIC18.2■□□□□ 0.5
PDE1AP54750 CR383656.12-201ENST00000549567 513 ntBASIC18.2■□□□□ 0.5
PDE1AP54750 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.2■□□□□ 0.5
PDE1AP54750 AC103988.2-201ENST00000561804 725 ntBASIC18.2■□□□□ 0.5
PDE1AP54750 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
PDE1AP54750 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.2■□□□□ 0.5
PDE1AP54750 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PDE1AP54750 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PDE1AP54750 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE1AP54750 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE1AP54750 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE1AP54750 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC18.2■□□□□ 0.5
PDE1AP54750 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE1AP54750 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.19■□□□□ 0.5
PDE1AP54750 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PDE1AP54750 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 AC006504.5-208ENST00000588784 2401 ntBASIC18.19■□□□□ 0.5
PDE1AP54750 LINC01230-201ENST00000625222 3017 ntBASIC18.19■□□□□ 0.5
PDE1AP54750 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.19■□□□□ 0.5
PDE1AP54750 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PDE1AP54750 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE1AP54750 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE1AP54750 CD8B2-202ENST00000417670 633 ntBASIC18.19■□□□□ 0.5
PDE1AP54750 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PDE1AP54750 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.19■□□□□ 0.5
PDE1AP54750 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PDE1AP54750 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.19■□□□□ 0.5
PDE1AP54750 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.19■□□□□ 0.5
PDE1AP54750 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.19■□□□□ 0.5
PDE1AP54750 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC18.19■□□□□ 0.5
PDE1AP54750 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.19■□□□□ 0.5
PDE1AP54750 OR10B1P-201ENST00000601666 907 ntBASIC18.19■□□□□ 0.5
PDE1AP54750 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 AC006453.4-201ENST00000636949 1252 ntBASIC18.19■□□□□ 0.5
PDE1AP54750 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
PDE1AP54750 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE1AP54750 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PDE1AP54750 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDE1AP54750 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDE1AP54750 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE1AP54750 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDE1AP54750 AC152010.1-201ENST00000415779 2006 ntBASIC18.18■□□□□ 0.5
PDE1AP54750 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE1AP54750 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE1AP54750 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PDE1AP54750 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PDE1AP54750 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE1AP54750 AC006001.1-201ENST00000325130 474 ntBASIC18.18■□□□□ 0.5
PDE1AP54750 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.18■□□□□ 0.5
PDE1AP54750 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE1AP54750 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.18■□□□□ 0.5
PDE1AP54750 AC004945.1-201ENST00000416738 983 ntBASIC18.18■□□□□ 0.5
PDE1AP54750 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.18■□□□□ 0.5
PDE1AP54750 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE1AP54750 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE1AP54750 CROCCP4-201ENST00000457096 498 ntBASIC18.18■□□□□ 0.5
PDE1AP54750 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.18■□□□□ 0.5
PDE1AP54750 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.18■□□□□ 0.5
PDE1AP54750 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.18■□□□□ 0.5
PDE1AP54750 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.18■□□□□ 0.5
PDE1AP54750 AC012645.4-201ENST00000610691 1061 ntBASIC18.18■□□□□ 0.5
PDE1AP54750 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.18■□□□□ 0.5
PDE1AP54750 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.18■□□□□ 0.5
PDE1AP54750 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE1AP54750 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.18■□□□□ 0.5
PDE1AP54750 AC015688.4-201ENST00000580780 1647 ntBASIC18.18■□□□□ 0.5
PDE1AP54750 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE1AP54750 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PDE1AP54750 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE1AP54750 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDE1AP54750 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE1AP54750 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE1AP54750 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE1AP54750 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms