Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 AC092506.1-202ENST00000401022 528 ntBASIC17.56■□□□□ 0.4
MRE11P49959 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.56■□□□□ 0.4
MRE11P49959 RHOQP3-201ENST00000437982 621 ntBASIC17.56■□□□□ 0.4
MRE11P49959 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.56■□□□□ 0.4
MRE11P49959 KRT18P34-201ENST00000488218 1270 ntBASIC17.56■□□□□ 0.4
MRE11P49959 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.56■□□□□ 0.4
MRE11P49959 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.56■□□□□ 0.4
MRE11P49959 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
MRE11P49959 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.56■□□□□ 0.4
MRE11P49959 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.56■□□□□ 0.4
MRE11P49959 TMEM261P1-201ENST00000604899 340 ntBASIC17.56■□□□□ 0.4
MRE11P49959 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
MRE11P49959 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.56■□□□□ 0.4
MRE11P49959 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
MRE11P49959 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRE11P49959 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.56■□□□□ 0.4
MRE11P49959 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
MRE11P49959 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC17.56■□□□□ 0.4
MRE11P49959 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17.55■□□□□ 0.4
MRE11P49959 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
MRE11P49959 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.55■□□□□ 0.4
MRE11P49959 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
MRE11P49959 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 AC004987.2-201ENST00000395959 1148 ntBASIC17.55■□□□□ 0.4
MRE11P49959 AC005237.2-201ENST00000434368 219 ntBASIC17.55■□□□□ 0.4
MRE11P49959 TIMM8BP1-201ENST00000452384 211 ntBASIC17.55■□□□□ 0.4
MRE11P49959 RPS15P9-201ENST00000494093 319 ntBASIC17.55■□□□□ 0.4
MRE11P49959 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.55■□□□□ 0.4
MRE11P49959 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.55■□□□□ 0.4
MRE11P49959 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.55■□□□□ 0.4
MRE11P49959 AL512356.2-201ENST00000546955 174 ntBASIC17.55■□□□□ 0.4
MRE11P49959 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.55■□□□□ 0.4
MRE11P49959 AC140878.1-201ENST00000565277 250 ntBASIC17.55■□□□□ 0.4
MRE11P49959 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.55■□□□□ 0.4
MRE11P49959 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.55■□□□□ 0.4
MRE11P49959 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.55■□□□□ 0.4
MRE11P49959 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC17.55■□□□□ 0.4
MRE11P49959 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.55■□□□□ 0.4
MRE11P49959 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.55■□□□□ 0.4
MRE11P49959 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MRE11P49959 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC17.54■□□□□ 0.4
MRE11P49959 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MRE11P49959 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.54■□□□□ 0.4
MRE11P49959 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
MRE11P49959 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
MRE11P49959 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MRE11P49959 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MRE11P49959 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MRE11P49959 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MRE11P49959 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
MRE11P49959 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MRE11P49959 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
MRE11P49959 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MRE11P49959 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.54■□□□□ 0.4
MRE11P49959 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MRE11P49959 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
MRE11P49959 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MRE11P49959 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MRE11P49959 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MRE11P49959 ELK2AP-201ENST00000392510 1007 ntBASIC17.54■□□□□ 0.4
MRE11P49959 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.54■□□□□ 0.4
MRE11P49959 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MRE11P49959 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.54■□□□□ 0.4
MRE11P49959 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.54■□□□□ 0.4
MRE11P49959 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms