Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC16.4■□□□□ 0.22
CENPFP49454 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 AC010632.2-201ENST00000588369 1224 ntBASIC16.4■□□□□ 0.22
CENPFP49454 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.4■□□□□ 0.22
CENPFP49454 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.4■□□□□ 0.22
CENPFP49454 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CENPFP49454 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.4■□□□□ 0.22
CENPFP49454 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.4■□□□□ 0.22
CENPFP49454 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.4■□□□□ 0.22
CENPFP49454 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.4■□□□□ 0.22
CENPFP49454 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.4■□□□□ 0.22
CENPFP49454 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.4■□□□□ 0.22
CENPFP49454 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CENPFP49454 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.4■□□□□ 0.22
CENPFP49454 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.4■□□□□ 0.22
CENPFP49454 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.4■□□□□ 0.22
CENPFP49454 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CENPFP49454 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.39■□□□□ 0.21
CENPFP49454 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.39■□□□□ 0.21
CENPFP49454 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CENPFP49454 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CENPFP49454 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPFP49454 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPFP49454 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CENPFP49454 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.39■□□□□ 0.21
CENPFP49454 SOD2-205ENST00000444946 917 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPFP49454 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CENPFP49454 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CENPFP49454 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.39■□□□□ 0.21
CENPFP49454 BRD7P5-201ENST00000299197 1822 ntBASIC16.39■□□□□ 0.21
CENPFP49454 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPFP49454 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPFP49454 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.39■□□□□ 0.21
CENPFP49454 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
CENPFP49454 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
CENPFP49454 AC019109.1-201ENST00000401725 1874 ntBASIC16.39■□□□□ 0.21
CENPFP49454 C18orf15-201ENST00000623680 2534 ntBASIC16.39■□□□□ 0.21
CENPFP49454 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CENPFP49454 NQO2-204ENST00000380454 851 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPFP49454 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CENPFP49454 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPFP49454 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.39■□□□□ 0.21
CENPFP49454 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPFP49454 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPFP49454 AC090136.2-201ENST00000517809 420 ntBASIC16.39■□□□□ 0.21
CENPFP49454 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.39■□□□□ 0.21
CENPFP49454 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CENPFP49454 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPFP49454 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CENPFP49454 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.38■□□□□ 0.21
CENPFP49454 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPFP49454 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPFP49454 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC16.38■□□□□ 0.21
CENPFP49454 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.38■□□□□ 0.21
CENPFP49454 TLE1P1-201ENST00000422965 589 ntBASIC16.38■□□□□ 0.21
CENPFP49454 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.38■□□□□ 0.21
CENPFP49454 FDPSP7-201ENST00000429043 1054 ntBASIC16.38■□□□□ 0.21
CENPFP49454 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.38■□□□□ 0.21
CENPFP49454 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC16.38■□□□□ 0.21
CENPFP49454 AC092896.1-201ENST00000465850 380 ntBASIC16.38■□□□□ 0.21
CENPFP49454 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC16.38■□□□□ 0.21
CENPFP49454 WASH7P-201ENST00000488147 1351 ntBASIC16.38■□□□□ 0.21
CENPFP49454 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPFP49454 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CENPFP49454 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPFP49454 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPFP49454 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPFP49454 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CENPFP49454 PKD1P6-201ENST00000343738 4769 ntBASIC16.38■□□□□ 0.21
CENPFP49454 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.38■□□□□ 0.21
CENPFP49454 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.38■□□□□ 0.21
CENPFP49454 RPL14-203ENST00000416518 812 ntTSL 3 BASIC16.38■□□□□ 0.21
CENPFP49454 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms