Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 AC007292.2-201ENST00000593524 1812 ntBASIC13.36□□□□□ -0.27
CSNK1A1P48729 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 INE1-201ENST00000456273 945 ntBASIC13.36□□□□□ -0.27
CSNK1A1P48729 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 AP005018.1-201ENST00000525475 301 ntBASIC13.36□□□□□ -0.27
CSNK1A1P48729 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 AL596325.1-201ENST00000563991 1082 ntBASIC13.36□□□□□ -0.27
CSNK1A1P48729 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 AC015936.2-201ENST00000593177 259 ntBASIC13.36□□□□□ -0.27
CSNK1A1P48729 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 MSTO2P-201ENST00000314835 1709 ntBASIC13.36□□□□□ -0.27
CSNK1A1P48729 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSNK1A1P48729 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CSNK1A1P48729 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 AL512384.1-201ENST00000406683 331 ntBASIC13.35□□□□□ -0.27
CSNK1A1P48729 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 TTTY23B-201ENST00000442790 549 ntBASIC13.35□□□□□ -0.27
CSNK1A1P48729 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms