Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC005252.2-201ENST00000624630 1141 ntBASIC15.68■□□□□ 0.1
SLC1A1P43005 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC1A1P43005 AC117489.1-201ENST00000625169 3217 ntBASIC15.68■□□□□ 0.1
SLC1A1P43005 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC1A1P43005 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SLC1A1P43005 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.68■□□□□ 0.1
SLC1A1P43005 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC1A1P43005 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC1A1P43005 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC1A1P43005 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC1A1P43005 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLC1A1P43005 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC1A1P43005 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A1P43005 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC1A1P43005 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A1P43005 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A1P43005 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A1P43005 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A1P43005 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.67■□□□□ 0.1
SLC1A1P43005 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A1P43005 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 AC007541.1-201ENST00000570282 1469 ntBASIC15.67■□□□□ 0.1
SLC1A1P43005 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A1P43005 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 BEND3P1-201ENST00000421591 1944 ntBASIC15.67■□□□□ 0.1
SLC1A1P43005 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A1P43005 MYCLP2-201ENST00000449268 967 ntBASIC15.67■□□□□ 0.1
SLC1A1P43005 UGT1A2P-201ENST00000454886 866 ntBASIC15.67■□□□□ 0.1
SLC1A1P43005 AC092183.1-201ENST00000469884 875 ntBASIC15.67■□□□□ 0.1
SLC1A1P43005 CYMP-203ENST00000474680 1263 ntBASIC15.67■□□□□ 0.1
SLC1A1P43005 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A1P43005 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC1A1P43005 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC1A1P43005 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC1A1P43005 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A1P43005 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SLC1A1P43005 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC1A1P43005 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A1P43005 AL928921.2-201ENST00000641325 2442 ntBASIC15.67■□□□□ 0.1
SLC1A1P43005 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A1P43005 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A1P43005 MYADML-201ENST00000474610 2147 ntBASIC15.67■□□□□ 0.1
SLC1A1P43005 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A1P43005 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC1A1P43005 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 AL365209.1-201ENST00000624418 6473 ntBASIC15.66■□□□□ 0.1
SLC1A1P43005 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC1A1P43005 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 AC090505.1-201ENST00000430515 1834 ntBASIC15.66■□□□□ 0.1
SLC1A1P43005 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SLC1A1P43005 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC1A1P43005 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 AL136172.1-201ENST00000598590 1394 ntBASIC15.66■□□□□ 0.1
SLC1A1P43005 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SLC1A1P43005 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC1A1P43005 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SLC1A1P43005 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SLC1A1P43005 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC1A1P43005 SERBP1P5-201ENST00000510079 1181 ntBASIC15.66■□□□□ 0.1
SLC1A1P43005 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC1A1P43005 AC131206.1-201ENST00000538078 1211 ntBASIC15.66■□□□□ 0.1
SLC1A1P43005 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SLC1A1P43005 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC1A1P43005 AL132655.2-201ENST00000596276 594 ntBASIC15.66■□□□□ 0.1
SLC1A1P43005 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC1A1P43005 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SLC1A1P43005 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC1A1P43005 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC1A1P43005 AL138725.1-201ENST00000407347 1314 ntBASIC15.66■□□□□ 0.1
SLC1A1P43005 KRT8P35-201ENST00000483942 1338 ntBASIC15.66■□□□□ 0.1
SLC1A1P43005 MRPL37P1-201ENST00000592451 1337 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms