Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF9P41273 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TNFSF9P41273 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF9P41273 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF9P41273 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TNFSF9P41273 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.11■□□□□ 0.17
TNFSF9P41273 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.11■□□□□ 0.17
TNFSF9P41273 AL354877.1-201ENST00000424412 413 ntBASIC16.11■□□□□ 0.17
TNFSF9P41273 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.11■□□□□ 0.17
TNFSF9P41273 AC104306.2-201ENST00000451877 341 ntBASIC16.11■□□□□ 0.17
TNFSF9P41273 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.11■□□□□ 0.17
TNFSF9P41273 ALG3P1-201ENST00000508806 1114 ntBASIC16.11■□□□□ 0.17
TNFSF9P41273 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.11■□□□□ 0.17
TNFSF9P41273 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.11■□□□□ 0.17
TNFSF9P41273 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.11■□□□□ 0.17
TNFSF9P41273 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF9P41273 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF9P41273 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF9P41273 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TNFSF9P41273 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF9P41273 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF9P41273 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.11■□□□□ 0.17
TNFSF9P41273 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.11■□□□□ 0.17
TNFSF9P41273 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF9P41273 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF9P41273 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF9P41273 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.11■□□□□ 0.17
TNFSF9P41273 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF9P41273 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.1■□□□□ 0.17
TNFSF9P41273 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 AC092135.3-201ENST00000624151 1846 ntBASIC16.1■□□□□ 0.17
TNFSF9P41273 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.1■□□□□ 0.17
TNFSF9P41273 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.1■□□□□ 0.17
TNFSF9P41273 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TNFSF9P41273 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.1■□□□□ 0.17
TNFSF9P41273 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TNFSF9P41273 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
TNFSF9P41273 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 PUDPP3-201ENST00000445368 636 ntBASIC16.1■□□□□ 0.17
TNFSF9P41273 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.1■□□□□ 0.17
TNFSF9P41273 PFN1P12-201ENST00000455938 534 ntBASIC16.1■□□□□ 0.17
TNFSF9P41273 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.1■□□□□ 0.17
TNFSF9P41273 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.1■□□□□ 0.17
TNFSF9P41273 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.1■□□□□ 0.17
TNFSF9P41273 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.1■□□□□ 0.17
TNFSF9P41273 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.1■□□□□ 0.17
TNFSF9P41273 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.1■□□□□ 0.17
TNFSF9P41273 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.1■□□□□ 0.17
TNFSF9P41273 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.1■□□□□ 0.17
TNFSF9P41273 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.1■□□□□ 0.17
TNFSF9P41273 AC009955.4-201ENST00000597192 544 ntBASIC16.1■□□□□ 0.17
TNFSF9P41273 AL118558.3-201ENST00000607414 1079 ntBASIC16.1■□□□□ 0.17
TNFSF9P41273 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.1■□□□□ 0.17
TNFSF9P41273 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.1■□□□□ 0.17
TNFSF9P41273 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.1■□□□□ 0.17
TNFSF9P41273 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TNFSF9P41273 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.1■□□□□ 0.17
TNFSF9P41273 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 MRPL37P1-201ENST00000592451 1337 ntBASIC16.1■□□□□ 0.17
TNFSF9P41273 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TNFSF9P41273 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TNFSF9P41273 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TNFSF9P41273 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
TNFSF9P41273 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TNFSF9P41273 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TNFSF9P41273 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.1■□□□□ 0.17
TNFSF9P41273 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF9P41273 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.09■□□□□ 0.17
TNFSF9P41273 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF9P41273 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TNFSF9P41273 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TNFSF9P41273 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF9P41273 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TNFSF9P41273 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF9P41273 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF9P41273 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF9P41273 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.09■□□□□ 0.17
TNFSF9P41273 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.09■□□□□ 0.17
TNFSF9P41273 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF9P41273 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.09■□□□□ 0.17
TNFSF9P41273 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.09■□□□□ 0.17
TNFSF9P41273 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.09■□□□□ 0.17
TNFSF9P41273 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TNFSF9P41273 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TNFSF9P41273 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.09■□□□□ 0.17
TNFSF9P41273 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TNFSF9P41273 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TNFSF9P41273 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms