Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.19■□□□□ 0.02
HADHAP40939 KLF2P2-201ENST00000416807 1039 ntBASIC15.19■□□□□ 0.02
HADHAP40939 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.19■□□□□ 0.02
HADHAP40939 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.19■□□□□ 0.02
HADHAP40939 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.19■□□□□ 0.02
HADHAP40939 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HADHAP40939 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HADHAP40939 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HADHAP40939 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.19■□□□□ 0.02
HADHAP40939 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.19■□□□□ 0.02
HADHAP40939 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.19■□□□□ 0.02
HADHAP40939 CLUHP6-201ENST00000580789 941 ntBASIC15.19■□□□□ 0.02
HADHAP40939 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.19■□□□□ 0.02
HADHAP40939 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.19■□□□□ 0.02
HADHAP40939 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HADHAP40939 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
HADHAP40939 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.19■□□□□ 0.02
HADHAP40939 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HADHAP40939 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHAP40939 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.19■□□□□ 0.02
HADHAP40939 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HADHAP40939 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
HADHAP40939 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHAP40939 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.19■□□□□ 0.02
HADHAP40939 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHAP40939 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHAP40939 AL137783.1-201ENST00000623494 1896 ntBASIC15.18■□□□□ 0.02
HADHAP40939 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HADHAP40939 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HADHAP40939 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.18■□□□□ 0.02
HADHAP40939 AC015802.1-201ENST00000588104 1449 ntBASIC15.18■□□□□ 0.02
HADHAP40939 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
HADHAP40939 LRRC59-203ENST00000576448 1531 ntBASIC15.18■□□□□ 0.02
HADHAP40939 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 INTS4P1-203ENST00000641008 3683 ntBASIC15.18■□□□□ 0.02
HADHAP40939 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.18■□□□□ 0.02
HADHAP40939 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.18■□□□□ 0.02
HADHAP40939 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.18■□□□□ 0.02
HADHAP40939 ACTBP8-201ENST00000403258 1108 ntBASIC15.18■□□□□ 0.02
HADHAP40939 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 TPT1P11-201ENST00000458482 498 ntBASIC15.18■□□□□ 0.02
HADHAP40939 AC022137.2-201ENST00000503482 481 ntBASIC15.18■□□□□ 0.02
HADHAP40939 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.18■□□□□ 0.02
HADHAP40939 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.18■□□□□ 0.02
HADHAP40939 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.18■□□□□ 0.02
HADHAP40939 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.18■□□□□ 0.02
HADHAP40939 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.18■□□□□ 0.02
HADHAP40939 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HADHAP40939 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HADHAP40939 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HADHAP40939 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HADHAP40939 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
HADHAP40939 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
HADHAP40939 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHAP40939 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HADHAP40939 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.17■□□□□ 0.02
HADHAP40939 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HADHAP40939 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HADHAP40939 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.17■□□□□ 0.02
HADHAP40939 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.17■□□□□ 0.02
HADHAP40939 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HADHAP40939 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.17■□□□□ 0.02
HADHAP40939 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HADHAP40939 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.17■□□□□ 0.02
HADHAP40939 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HADHAP40939 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HADHAP40939 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HADHAP40939 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HADHAP40939 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms