Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RFC5P40937 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFC5P40937 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.48■□□□□ 0.23
RFC5P40937 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RFC5P40937 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RFC5P40937 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.48■□□□□ 0.23
RFC5P40937 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RFC5P40937 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
RFC5P40937 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RFC5P40937 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RFC5P40937 AC067930.6-201ENST00000623257 4947 ntBASIC16.48■□□□□ 0.23
RFC5P40937 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.48■□□□□ 0.23
RFC5P40937 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RFC5P40937 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RFC5P40937 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.48■□□□□ 0.23
RFC5P40937 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.48■□□□□ 0.23
RFC5P40937 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
RFC5P40937 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.48■□□□□ 0.23
RFC5P40937 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.48■□□□□ 0.23
RFC5P40937 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.48■□□□□ 0.23
RFC5P40937 RN7SL602P-201ENST00000578326 324 ntBASIC16.48■□□□□ 0.23
RFC5P40937 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.48■□□□□ 0.23
RFC5P40937 AC243960.2-201ENST00000600996 747 ntBASIC16.48■□□□□ 0.23
RFC5P40937 AC006058.4-201ENST00000624016 1670 ntBASIC16.48■□□□□ 0.23
RFC5P40937 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.48■□□□□ 0.23
RFC5P40937 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 LINC00528-201ENST00000600723 2160 ntBASIC16.48■□□□□ 0.23
RFC5P40937 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RFC5P40937 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.48■□□□□ 0.23
RFC5P40937 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.48■□□□□ 0.23
RFC5P40937 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFC5P40937 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.48■□□□□ 0.23
RFC5P40937 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 AC007292.2-201ENST00000593524 1812 ntBASIC16.47■□□□□ 0.23
RFC5P40937 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.47■□□□□ 0.23
RFC5P40937 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.47■□□□□ 0.23
RFC5P40937 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RFC5P40937 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.47■□□□□ 0.23
RFC5P40937 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.47■□□□□ 0.23
RFC5P40937 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.47■□□□□ 0.23
RFC5P40937 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.47■□□□□ 0.23
RFC5P40937 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.47■□□□□ 0.23
RFC5P40937 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.47■□□□□ 0.23
RFC5P40937 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 AC004898.1-201ENST00000451057 766 ntBASIC16.47■□□□□ 0.23
RFC5P40937 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.47■□□□□ 0.23
RFC5P40937 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.47■□□□□ 0.23
RFC5P40937 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.47■□□□□ 0.23
RFC5P40937 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 DUX4L46-201ENST00000566845 751 ntBASIC16.47■□□□□ 0.23
RFC5P40937 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RFC5P40937 RN7SL121P-201ENST00000584223 273 ntBASIC16.47■□□□□ 0.23
RFC5P40937 AC009955.4-201ENST00000597192 544 ntBASIC16.47■□□□□ 0.23
RFC5P40937 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
RFC5P40937 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
RFC5P40937 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC5P40937 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.47■□□□□ 0.23
RFC5P40937 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.47■□□□□ 0.23
RFC5P40937 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RFC5P40937 TNRC18P2-201ENST00000417666 2714 ntBASIC16.47■□□□□ 0.23
RFC5P40937 AL009178.2-201ENST00000597278 2719 ntBASIC16.47■□□□□ 0.23
RFC5P40937 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RFC5P40937 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RFC5P40937 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RFC5P40937 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.46■□□□□ 0.23
RFC5P40937 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RFC5P40937 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.46■□□□□ 0.23
RFC5P40937 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms