Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.7■□□□□ 0.58
COL15A1P39059 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL15A1P39059 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
COL15A1P39059 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COL15A1P39059 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.69■□□□□ 0.58
COL15A1P39059 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.69■□□□□ 0.58
COL15A1P39059 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.69■□□□□ 0.58
COL15A1P39059 RPL13AP19-201ENST00000434320 584 ntBASIC18.69■□□□□ 0.58
COL15A1P39059 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.69■□□□□ 0.58
COL15A1P39059 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.69■□□□□ 0.58
COL15A1P39059 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.69■□□□□ 0.58
COL15A1P39059 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.69■□□□□ 0.58
COL15A1P39059 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.69■□□□□ 0.58
COL15A1P39059 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.69■□□□□ 0.58
COL15A1P39059 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.69■□□□□ 0.58
COL15A1P39059 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.69■□□□□ 0.58
COL15A1P39059 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.69■□□□□ 0.58
COL15A1P39059 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
COL15A1P39059 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.69■□□□□ 0.58
COL15A1P39059 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.69■□□□□ 0.58
COL15A1P39059 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
COL15A1P39059 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.69■□□□□ 0.58
COL15A1P39059 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
COL15A1P39059 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 AGAP7P-201ENST00000582299 2062 ntBASIC18.69■□□□□ 0.58
COL15A1P39059 AGAP14-201ENST00000624701 2060 ntBASIC18.69■□□□□ 0.58
COL15A1P39059 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.69■□□□□ 0.58
COL15A1P39059 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL15A1P39059 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
COL15A1P39059 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.68■□□□□ 0.58
COL15A1P39059 RPL7P35-201ENST00000446943 740 ntBASIC18.68■□□□□ 0.58
COL15A1P39059 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.68■□□□□ 0.58
COL15A1P39059 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.68■□□□□ 0.58
COL15A1P39059 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.68■□□□□ 0.58
COL15A1P39059 MIR4649-201ENST00000582839 64 ntBASIC18.68■□□□□ 0.58
COL15A1P39059 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.68■□□□□ 0.58
COL15A1P39059 MIR4522-201ENST00000584932 87 ntBASIC18.68■□□□□ 0.58
COL15A1P39059 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.68■□□□□ 0.58
COL15A1P39059 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
COL15A1P39059 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.68■□□□□ 0.58
COL15A1P39059 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.68■□□□□ 0.58
COL15A1P39059 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.68■□□□□ 0.58
COL15A1P39059 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
COL15A1P39059 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COL15A1P39059 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
COL15A1P39059 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COL15A1P39059 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
COL15A1P39059 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 TSPY25P-201ENST00000429463 745 ntBASIC18.68■□□□□ 0.58
COL15A1P39059 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.68■□□□□ 0.58
COL15A1P39059 OR2R1P-201ENST00000441404 914 ntBASIC18.68■□□□□ 0.58
COL15A1P39059 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL15A1P39059 RN7SL818P-201ENST00000485099 259 ntBASIC18.68■□□□□ 0.58
COL15A1P39059 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
COL15A1P39059 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC18.68■□□□□ 0.58
COL15A1P39059 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
COL15A1P39059 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
COL15A1P39059 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.68■□□□□ 0.58
COL15A1P39059 RN7SL725P-201ENST00000606439 259 ntBASIC18.68■□□□□ 0.58
COL15A1P39059 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.67■□□□□ 0.58
COL15A1P39059 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL15A1P39059 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL15A1P39059 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL15A1P39059 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms