Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.33□□□□□ -0.12
KRT20P35900 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.33□□□□□ -0.12
KRT20P35900 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.33□□□□□ -0.12
KRT20P35900 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.33□□□□□ -0.12
KRT20P35900 AC027307.3-201ENST00000594262 1100 ntBASIC14.33□□□□□ -0.12
KRT20P35900 AC025181.2-201ENST00000606994 802 ntBASIC14.33□□□□□ -0.12
KRT20P35900 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.33□□□□□ -0.12
KRT20P35900 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.33□□□□□ -0.12
KRT20P35900 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 AC092053.3-201ENST00000641308 4975 ntBASIC14.33□□□□□ -0.12
KRT20P35900 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
KRT20P35900 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
KRT20P35900 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
KRT20P35900 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.33□□□□□ -0.12
KRT20P35900 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.33□□□□□ -0.12
KRT20P35900 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRT20P35900 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
KRT20P35900 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.32□□□□□ -0.12
KRT20P35900 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
KRT20P35900 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 AC079781.5-202ENST00000641784 3743 ntBASIC14.32□□□□□ -0.12
KRT20P35900 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
KRT20P35900 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.32□□□□□ -0.12
KRT20P35900 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.32□□□□□ -0.12
KRT20P35900 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 AC123567.1-201ENST00000548294 1261 ntBASIC14.32□□□□□ -0.12
KRT20P35900 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
KRT20P35900 AC140912.1-201ENST00000577171 1054 ntBASIC14.32□□□□□ -0.12
KRT20P35900 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.32□□□□□ -0.12
KRT20P35900 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 AC007431.3-201ENST00000623221 587 ntBASIC14.32□□□□□ -0.12
KRT20P35900 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.32□□□□□ -0.12
KRT20P35900 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
KRT20P35900 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 ACE3P-201ENST00000423435 1973 ntBASIC14.32□□□□□ -0.12
KRT20P35900 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.32□□□□□ -0.12
KRT20P35900 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
KRT20P35900 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 AC010327.5-201ENST00000586923 3061 ntBASIC14.32□□□□□ -0.12
KRT20P35900 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
KRT20P35900 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
KRT20P35900 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
KRT20P35900 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
KRT20P35900 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 AL928921.2-201ENST00000641325 2442 ntBASIC14.32□□□□□ -0.12
KRT20P35900 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.32□□□□□ -0.12
KRT20P35900 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.32□□□□□ -0.12
KRT20P35900 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRT20P35900 AC136759.1-202ENST00000530858 2194 ntBASIC14.32□□□□□ -0.12
KRT20P35900 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT20P35900 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
KRT20P35900 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.31□□□□□ -0.12
KRT20P35900 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT20P35900 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRT20P35900 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms