Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KCNA3P22001 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
KCNA3P22001 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
KCNA3P22001 AC026470.1-201ENST00000478038 846 ntBASIC17.96■□□□□ 0.47
KCNA3P22001 RNA5SP406-201ENST00000516106 112 ntBASIC17.96■□□□□ 0.47
KCNA3P22001 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.96■□□□□ 0.47
KCNA3P22001 USB1-205ENST00000561743 1135 ntTSL 3 BASIC17.96■□□□□ 0.47
KCNA3P22001 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC17.96■□□□□ 0.47
KCNA3P22001 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
KCNA3P22001 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC17.96■□□□□ 0.47
KCNA3P22001 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.96■□□□□ 0.47
KCNA3P22001 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
KCNA3P22001 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.96■□□□□ 0.47
KCNA3P22001 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA3P22001 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
KCNA3P22001 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.96■□□□□ 0.46
KCNA3P22001 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.96■□□□□ 0.46
KCNA3P22001 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.95■□□□□ 0.46
KCNA3P22001 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.95■□□□□ 0.46
KCNA3P22001 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KCNA3P22001 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.95■□□□□ 0.46
KCNA3P22001 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.95■□□□□ 0.46
KCNA3P22001 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KCNA3P22001 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.95■□□□□ 0.46
KCNA3P22001 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC17.95■□□□□ 0.46
KCNA3P22001 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC17.95■□□□□ 0.46
KCNA3P22001 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.95■□□□□ 0.46
KCNA3P22001 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC17.95■□□□□ 0.46
KCNA3P22001 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.95■□□□□ 0.46
KCNA3P22001 AC063952.3-201ENST00000467756 308 ntBASIC17.95■□□□□ 0.46
KCNA3P22001 AC083801.1-201ENST00000491689 358 ntBASIC17.95■□□□□ 0.46
KCNA3P22001 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.95■□□□□ 0.46
KCNA3P22001 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC17.95■□□□□ 0.46
KCNA3P22001 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.95■□□□□ 0.46
KCNA3P22001 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.95■□□□□ 0.46
KCNA3P22001 AC124068.2-201ENST00000569473 1109 ntBASIC17.95■□□□□ 0.46
KCNA3P22001 AP005264.6-204ENST00000588436 719 ntBASIC17.95■□□□□ 0.46
KCNA3P22001 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC17.95■□□□□ 0.46
KCNA3P22001 AC006483.2-201ENST00000609813 515 ntBASIC17.95■□□□□ 0.46
KCNA3P22001 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.95■□□□□ 0.46
KCNA3P22001 MIR6746-201ENST00000620971 63 ntBASIC17.95■□□□□ 0.46
KCNA3P22001 LINC00244-201ENST00000625073 613 ntBASIC17.95■□□□□ 0.46
KCNA3P22001 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.95■□□□□ 0.46
KCNA3P22001 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.95■□□□□ 0.46
KCNA3P22001 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.95■□□□□ 0.46
KCNA3P22001 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
KCNA3P22001 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA3P22001 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.95■□□□□ 0.46
KCNA3P22001 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
KCNA3P22001 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
KCNA3P22001 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.94■□□□□ 0.46
KCNA3P22001 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.94■□□□□ 0.46
KCNA3P22001 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.94■□□□□ 0.46
KCNA3P22001 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.94■□□□□ 0.46
KCNA3P22001 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.94■□□□□ 0.46
KCNA3P22001 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC17.94■□□□□ 0.46
KCNA3P22001 AC095040.1-201ENST00000513286 675 ntBASIC17.94■□□□□ 0.46
KCNA3P22001 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC17.94■□□□□ 0.46
KCNA3P22001 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.94■□□□□ 0.46
KCNA3P22001 GOLGA2P7-209ENST00000560408 745 ntBASIC17.94■□□□□ 0.46
KCNA3P22001 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
KCNA3P22001 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.94■□□□□ 0.46
KCNA3P22001 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
KCNA3P22001 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
KCNA3P22001 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms