Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.58□□□□□ -0.4
CXCL3P19876 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CXCL3P19876 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.58□□□□□ -0.4
CXCL3P19876 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CXCL3P19876 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.58□□□□□ -0.4
CXCL3P19876 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.58□□□□□ -0.4
CXCL3P19876 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.58□□□□□ -0.4
CXCL3P19876 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CXCL3P19876 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CXCL3P19876 AF238378.1-201ENST00000526806 358 ntBASIC12.58□□□□□ -0.4
CXCL3P19876 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.58□□□□□ -0.4
CXCL3P19876 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
CXCL3P19876 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.58□□□□□ -0.4
CXCL3P19876 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.58□□□□□ -0.4
CXCL3P19876 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.58□□□□□ -0.4
CXCL3P19876 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CXCL3P19876 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
CXCL3P19876 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.58□□□□□ -0.4
CXCL3P19876 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.58□□□□□ -0.4
CXCL3P19876 AP001972.5-201ENST00000624624 2338 ntBASIC12.58□□□□□ -0.4
CXCL3P19876 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.58□□□□□ -0.4
CXCL3P19876 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CXCL3P19876 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.58□□□□□ -0.4
CXCL3P19876 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.58□□□□□ -0.4
CXCL3P19876 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.58□□□□□ -0.4
CXCL3P19876 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CXCL3P19876 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.58□□□□□ -0.4
CXCL3P19876 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.58□□□□□ -0.4
CXCL3P19876 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.58□□□□□ -0.4
CXCL3P19876 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CXCL3P19876 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.57□□□□□ -0.4
CXCL3P19876 FOXO1B-201ENST00000504678 1527 ntBASIC12.57□□□□□ -0.4
CXCL3P19876 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 AC015819.3-201ENST00000624305 2674 ntBASIC12.57□□□□□ -0.4
CXCL3P19876 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CXCL3P19876 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
CXCL3P19876 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CXCL3P19876 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.57□□□□□ -0.4
CXCL3P19876 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.57□□□□□ -0.4
CXCL3P19876 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.57□□□□□ -0.4
CXCL3P19876 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CXCL3P19876 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.57□□□□□ -0.4
CXCL3P19876 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
CXCL3P19876 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CXCL3P19876 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
CXCL3P19876 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.57□□□□□ -0.4
CXCL3P19876 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.57□□□□□ -0.4
CXCL3P19876 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.57□□□□□ -0.4
CXCL3P19876 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.57□□□□□ -0.4
CXCL3P19876 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.57□□□□□ -0.4
CXCL3P19876 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.57□□□□□ -0.4
CXCL3P19876 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.57□□□□□ -0.4
CXCL3P19876 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.57□□□□□ -0.4
CXCL3P19876 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 TRIM80P-201ENST00000455685 2848 ntBASIC12.57□□□□□ -0.4
CXCL3P19876 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.57□□□□□ -0.4
CXCL3P19876 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms