Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 C1QBPP1-201ENST00000400117 770 ntBASIC13.96□□□□□ -0.17
PRKCAP17252 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.96□□□□□ -0.17
PRKCAP17252 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.96□□□□□ -0.17
PRKCAP17252 AL359711.2-201ENST00000563105 872 ntBASIC13.96□□□□□ -0.17
PRKCAP17252 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.96□□□□□ -0.17
PRKCAP17252 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.96□□□□□ -0.17
PRKCAP17252 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.96□□□□□ -0.17
PRKCAP17252 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.96□□□□□ -0.17
PRKCAP17252 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PRKCAP17252 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PRKCAP17252 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.96□□□□□ -0.17
PRKCAP17252 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PRKCAP17252 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.96□□□□□ -0.17
PRKCAP17252 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.96□□□□□ -0.17
PRKCAP17252 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.96□□□□□ -0.17
PRKCAP17252 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
PRKCAP17252 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.96□□□□□ -0.18
PRKCAP17252 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PRKCAP17252 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
PRKCAP17252 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PRKCAP17252 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PRKCAP17252 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
PRKCAP17252 WASH3P-207ENST00000560956 1394 ntBASIC13.96□□□□□ -0.18
PRKCAP17252 REXO1L4P-201ENST00000605109 1937 ntBASIC13.96□□□□□ -0.18
PRKCAP17252 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.96□□□□□ -0.18
PRKCAP17252 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.95□□□□□ -0.18
PRKCAP17252 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PRKCAP17252 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PRKCAP17252 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 AC012508.2-201ENST00000567613 1472 ntBASIC13.95□□□□□ -0.18
PRKCAP17252 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.95□□□□□ -0.18
PRKCAP17252 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.95□□□□□ -0.18
PRKCAP17252 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PRKCAP17252 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
PRKCAP17252 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
PRKCAP17252 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.95□□□□□ -0.18
PRKCAP17252 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 SOCS2P1-201ENST00000417727 557 ntBASIC13.95□□□□□ -0.18
PRKCAP17252 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.95□□□□□ -0.18
PRKCAP17252 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.95□□□□□ -0.18
PRKCAP17252 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.95□□□□□ -0.18
PRKCAP17252 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.95□□□□□ -0.18
PRKCAP17252 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.95□□□□□ -0.18
PRKCAP17252 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.95□□□□□ -0.18
PRKCAP17252 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
PRKCAP17252 AC133539.2-201ENST00000604757 467 ntBASIC13.95□□□□□ -0.18
PRKCAP17252 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.95□□□□□ -0.18
PRKCAP17252 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PRKCAP17252 KRT8P22-201ENST00000562317 1415 ntBASIC13.95□□□□□ -0.18
PRKCAP17252 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.95□□□□□ -0.18
PRKCAP17252 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PRKCAP17252 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 AC007787.1-201ENST00000588095 1583 ntBASIC13.95□□□□□ -0.18
PRKCAP17252 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PRKCAP17252 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.95□□□□□ -0.18
PRKCAP17252 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
PRKCAP17252 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.95□□□□□ -0.18
PRKCAP17252 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PRKCAP17252 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCAP17252 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.94□□□□□ -0.18
PRKCAP17252 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCAP17252 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PRKCAP17252 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms