Protein–RNA interactions for Protein: P11229

CHRM1, Muscarinic acetylcholine receptor M1, humanhuman

Predicted RBP Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM1P11229 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CHRM1P11229 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.05■□□□□ 0.16
CHRM1P11229 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CHRM1P11229 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.05■□□□□ 0.16
CHRM1P11229 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHRM1P11229 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CHRM1P11229 AP001282.1-201ENST00000531301 1499 ntBASIC16.05■□□□□ 0.16
CHRM1P11229 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.05■□□□□ 0.16
CHRM1P11229 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CHRM1P11229 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC16.05■□□□□ 0.16
CHRM1P11229 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.05■□□□□ 0.16
CHRM1P11229 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHRM1P11229 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.05■□□□□ 0.16
CHRM1P11229 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.05■□□□□ 0.16
CHRM1P11229 AL162726.2-201ENST00000438986 1017 ntBASIC16.05■□□□□ 0.16
CHRM1P11229 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.05■□□□□ 0.16
CHRM1P11229 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.05■□□□□ 0.16
CHRM1P11229 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.05■□□□□ 0.16
CHRM1P11229 AC098862.1-201ENST00000504991 413 ntBASIC16.05■□□□□ 0.16
CHRM1P11229 MTND4LP31-201ENST00000514859 294 ntBASIC16.05■□□□□ 0.16
CHRM1P11229 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC16.05■□□□□ 0.16
CHRM1P11229 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.05■□□□□ 0.16
CHRM1P11229 AC131934.1-201ENST00000527799 912 ntTSL 5 BASIC16.05■□□□□ 0.16
CHRM1P11229 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.05■□□□□ 0.16
CHRM1P11229 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.05■□□□□ 0.16
CHRM1P11229 AL109741.3-201ENST00000561748 592 ntBASIC16.05■□□□□ 0.16
CHRM1P11229 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.05■□□□□ 0.16
CHRM1P11229 AC092474.3-201ENST00000603022 568 ntBASIC16.05■□□□□ 0.16
CHRM1P11229 AP003072.3-201ENST00000623456 594 ntBASIC16.05■□□□□ 0.16
CHRM1P11229 CU634019.7-201ENST00000624153 1185 ntBASIC16.05■□□□□ 0.16
CHRM1P11229 FP236241.2-201ENST00000624906 1185 ntBASIC16.05■□□□□ 0.16
CHRM1P11229 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CHRM1P11229 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CHRM1P11229 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
CHRM1P11229 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.05■□□□□ 0.16
CHRM1P11229 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHRM1P11229 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CHRM1P11229 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRM1P11229 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHRM1P11229 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRM1P11229 MTCO1P8-201ENST00000416914 1523 ntBASIC16.04■□□□□ 0.16
CHRM1P11229 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.04■□□□□ 0.16
CHRM1P11229 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRM1P11229 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC16.04■□□□□ 0.16
CHRM1P11229 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRM1P11229 AC100803.1-201ENST00000501440 1380 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRM1P11229 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.04■□□□□ 0.16
CHRM1P11229 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CHRM1P11229 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRM1P11229 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRM1P11229 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHRM1P11229 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRM1P11229 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRM1P11229 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.04■□□□□ 0.16
CHRM1P11229 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRM1P11229 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.04■□□□□ 0.16
CHRM1P11229 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.04■□□□□ 0.16
CHRM1P11229 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.04■□□□□ 0.16
CHRM1P11229 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRM1P11229 PHKG1P2-201ENST00000457537 863 ntBASIC16.04■□□□□ 0.16
CHRM1P11229 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC16.04■□□□□ 0.16
CHRM1P11229 OR52A4P-202ENST00000481634 799 ntBASIC16.04■□□□□ 0.16
CHRM1P11229 OR52A4P-203ENST00000498233 1014 ntBASIC16.04■□□□□ 0.16
CHRM1P11229 SLED1-202ENST00000512051 380 ntBASIC16.04■□□□□ 0.16
CHRM1P11229 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC16.04■□□□□ 0.16
CHRM1P11229 AC104989.1-201ENST00000519711 778 ntBASIC16.04■□□□□ 0.16
CHRM1P11229 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.04■□□□□ 0.16
CHRM1P11229 OR8K4P-201ENST00000534608 872 ntBASIC16.04■□□□□ 0.16
CHRM1P11229 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CHRM1P11229 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.04■□□□□ 0.16
CHRM1P11229 CLUHP6-201ENST00000580789 941 ntBASIC16.04■□□□□ 0.16
CHRM1P11229 AC079598.2-201ENST00000599191 1294 ntBASIC16.04■□□□□ 0.16
CHRM1P11229 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.04■□□□□ 0.16
CHRM1P11229 AC000095.1-201ENST00000603208 874 ntBASIC16.04■□□□□ 0.16
CHRM1P11229 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.04■□□□□ 0.16
CHRM1P11229 AC133552.6-201ENST00000613406 534 ntBASIC16.04■□□□□ 0.16
CHRM1P11229 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHRM1P11229 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRM1P11229 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CHRM1P11229 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CHRM1P11229 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRM1P11229 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms