Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.66■□□□□ 0.1
RB1P06400 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RB1P06400 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.66■□□□□ 0.1
RB1P06400 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.66■□□□□ 0.1
RB1P06400 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RB1P06400 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RB1P06400 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RB1P06400 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.66■□□□□ 0.1
RB1P06400 AC105137.3-201ENST00000617588 984 ntBASIC15.66■□□□□ 0.1
RB1P06400 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RB1P06400 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RB1P06400 AC010491.1-201ENST00000563101 2797 ntBASIC15.66■□□□□ 0.1
RB1P06400 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RB1P06400 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RB1P06400 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RB1P06400 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RB1P06400 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RB1P06400 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.66■□□□□ 0.1
RB1P06400 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.66■□□□□ 0.1
RB1P06400 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RB1P06400 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RB1P06400 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RB1P06400 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.65■□□□□ 0.1
RB1P06400 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.65■□□□□ 0.1
RB1P06400 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.65■□□□□ 0.1
RB1P06400 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 BAK1P1-201ENST00000317045 636 ntBASIC15.65■□□□□ 0.1
RB1P06400 RNA5SP359-201ENST00000364838 113 ntBASIC15.65■□□□□ 0.1
RB1P06400 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RB1P06400 HIST2H2BA-201ENST00000412169 381 ntBASIC15.65■□□□□ 0.1
RB1P06400 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.65■□□□□ 0.1
RB1P06400 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.65■□□□□ 0.1
RB1P06400 ORAOV1P1-201ENST00000503108 395 ntBASIC15.65■□□□□ 0.1
RB1P06400 TMCO5B-205ENST00000530020 894 ntBASIC15.65■□□□□ 0.1
RB1P06400 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.65■□□□□ 0.1
RB1P06400 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.65■□□□□ 0.1
RB1P06400 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.65■□□□□ 0.1
RB1P06400 AC141586.1-203ENST00000567242 366 ntBASIC15.65■□□□□ 0.1
RB1P06400 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.65■□□□□ 0.1
RB1P06400 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.65■□□□□ 0.1
RB1P06400 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RB1P06400 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
RB1P06400 AC023090.2-201ENST00000625182 2110 ntBASIC15.65■□□□□ 0.1
RB1P06400 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RB1P06400 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.65■□□□□ 0.1
RB1P06400 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RB1P06400 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RB1P06400 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.64■□□□□ 0.1
RB1P06400 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.64■□□□□ 0.09
RB1P06400 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.64■□□□□ 0.09
RB1P06400 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
RB1P06400 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.64■□□□□ 0.09
RB1P06400 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.64■□□□□ 0.09
RB1P06400 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RB1P06400 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.64■□□□□ 0.09
RB1P06400 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.64■□□□□ 0.09
RB1P06400 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.64■□□□□ 0.09
RB1P06400 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.64■□□□□ 0.09
RB1P06400 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RB1P06400 ALG1L6P-201ENST00000515248 758 ntBASIC15.64■□□□□ 0.09
RB1P06400 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RB1P06400 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.64■□□□□ 0.09
RB1P06400 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.64■□□□□ 0.09
RB1P06400 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.64■□□□□ 0.09
RB1P06400 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.64■□□□□ 0.09
RB1P06400 RN7SL470P-201ENST00000583069 259 ntBASIC15.64■□□□□ 0.09
RB1P06400 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.64■□□□□ 0.09
RB1P06400 AC107464.3-201ENST00000609172 737 ntBASIC15.64■□□□□ 0.09
RB1P06400 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.64■□□□□ 0.09
RB1P06400 AC127024.7-201ENST00000625101 200 ntBASIC15.64■□□□□ 0.09
RB1P06400 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.64■□□□□ 0.09
RB1P06400 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RB1P06400 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RB1P06400 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.64■□□□□ 0.09
RB1P06400 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.64■□□□□ 0.09
RB1P06400 AC090616.6-203ENST00000579186 1945 ntBASIC15.64■□□□□ 0.09
RB1P06400 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.64■□□□□ 0.09
RB1P06400 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms