Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC023908.3-201ENST00000564211 3047 ntBASIC17.41■□□□□ 0.38
CDKL5O76039 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CDKL5O76039 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL5O76039 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDKL5O76039 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKL5O76039 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 AC092135.3-201ENST00000624151 1846 ntBASIC17.4■□□□□ 0.38
CDKL5O76039 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKL5O76039 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CDKL5O76039 POM121L8P-201ENST00000417732 1281 ntBASIC17.4■□□□□ 0.38
CDKL5O76039 POM121L9P-203ENST00000441984 1285 ntBASIC17.4■□□□□ 0.38
CDKL5O76039 TTTY23B-201ENST00000442790 549 ntBASIC17.4■□□□□ 0.38
CDKL5O76039 INE1-201ENST00000456273 945 ntBASIC17.4■□□□□ 0.38
CDKL5O76039 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKL5O76039 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.4■□□□□ 0.38
CDKL5O76039 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CDKL5O76039 AC131206.1-201ENST00000538078 1211 ntBASIC17.4■□□□□ 0.38
CDKL5O76039 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.4■□□□□ 0.38
CDKL5O76039 AC138696.2-201ENST00000607376 223 ntBASIC17.4■□□□□ 0.38
CDKL5O76039 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.4■□□□□ 0.38
CDKL5O76039 AC132938.4-201ENST00000623835 848 ntBASIC17.4■□□□□ 0.38
CDKL5O76039 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKL5O76039 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.4■□□□□ 0.38
CDKL5O76039 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 CLUHP2-201ENST00000426660 1303 ntBASIC17.4■□□□□ 0.38
CDKL5O76039 AC005089.1-201ENST00000619486 2241 ntBASIC17.4■□□□□ 0.38
CDKL5O76039 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDKL5O76039 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDKL5O76039 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDKL5O76039 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CDKL5O76039 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.39■□□□□ 0.38
CDKL5O76039 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.39■□□□□ 0.37
CDKL5O76039 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.39■□□□□ 0.37
CDKL5O76039 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
CDKL5O76039 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDKL5O76039 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.39■□□□□ 0.37
CDKL5O76039 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.39■□□□□ 0.37
CDKL5O76039 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CDKL5O76039 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 TPM3P8-201ENST00000330554 643 ntBASIC17.39■□□□□ 0.37
CDKL5O76039 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.39■□□□□ 0.37
CDKL5O76039 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.39■□□□□ 0.37
CDKL5O76039 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 C2orf27AP3-201ENST00000434123 579 ntBASIC17.39■□□□□ 0.37
CDKL5O76039 FTLP10-202ENST00000505798 471 ntBASIC17.39■□□□□ 0.37
CDKL5O76039 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDKL5O76039 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDKL5O76039 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.39■□□□□ 0.37
CDKL5O76039 AL354718.3-201ENST00000616414 581 ntBASIC17.39■□□□□ 0.37
CDKL5O76039 AC138466.3-201ENST00000619983 221 ntBASIC17.39■□□□□ 0.37
CDKL5O76039 CR382287.1-201ENST00000623954 586 ntBASIC17.39■□□□□ 0.37
CDKL5O76039 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.39■□□□□ 0.37
CDKL5O76039 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDKL5O76039 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CDKL5O76039 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDKL5O76039 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.39■□□□□ 0.37
CDKL5O76039 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms