Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRIM3O75382 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.05□□□□□ -0.16
TRIM3O75382 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
TRIM3O75382 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.05□□□□□ -0.16
TRIM3O75382 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 AC005229.1-201ENST00000392885 409 ntBASIC14.05□□□□□ -0.16
TRIM3O75382 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 BAATP1-201ENST00000412284 1225 ntBASIC14.05□□□□□ -0.16
TRIM3O75382 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.05□□□□□ -0.16
TRIM3O75382 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM3O75382 AC012441.1-201ENST00000446669 685 ntBASIC14.05□□□□□ -0.16
TRIM3O75382 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.05□□□□□ -0.16
TRIM3O75382 AC022137.2-201ENST00000503482 481 ntBASIC14.05□□□□□ -0.16
TRIM3O75382 AP001889.1-201ENST00000525414 633 ntBASIC14.05□□□□□ -0.16
TRIM3O75382 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.05□□□□□ -0.16
TRIM3O75382 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM3O75382 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.05□□□□□ -0.16
TRIM3O75382 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM3O75382 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRIM3O75382 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 AC015656.1-201ENST00000624209 3578 ntBASIC14.05□□□□□ -0.16
TRIM3O75382 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM3O75382 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM3O75382 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
TRIM3O75382 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM3O75382 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
TRIM3O75382 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRIM3O75382 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRIM3O75382 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM3O75382 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM3O75382 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRIM3O75382 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.04□□□□□ -0.16
TRIM3O75382 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.04□□□□□ -0.16
TRIM3O75382 ACA64.2-201ENST00000459014 129 ntBASIC14.04□□□□□ -0.16
TRIM3O75382 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.04□□□□□ -0.16
TRIM3O75382 HILS1-202ENST00000545329 423 ntBASIC14.04□□□□□ -0.16
TRIM3O75382 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM3O75382 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM3O75382 RAB43P1-201ENST00000561790 589 ntBASIC14.04□□□□□ -0.16
TRIM3O75382 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM3O75382 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM3O75382 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM3O75382 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM3O75382 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRIM3O75382 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.04□□□□□ -0.16
TRIM3O75382 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM3O75382 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 AP005019.2-201ENST00000615104 511 ntBASIC14.04□□□□□ -0.16
TRIM3O75382 BX539320.1-201ENST00000623759 877 ntBASIC14.04□□□□□ -0.16
TRIM3O75382 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRIM3O75382 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRIM3O75382 AC018665.1-201ENST00000622927 1362 ntBASIC14.04□□□□□ -0.16
TRIM3O75382 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM3O75382 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM3O75382 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM3O75382 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM3O75382 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
TRIM3O75382 MSTO2P-201ENST00000314835 1709 ntBASIC14.04□□□□□ -0.16
TRIM3O75382 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.04□□□□□ -0.16
TRIM3O75382 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
TRIM3O75382 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.04□□□□□ -0.16
TRIM3O75382 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM3O75382 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM3O75382 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM3O75382 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms