Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
O00370 AL354718.3-201ENST00000616414 581 ntBASIC15.98■□□□□ 0.15
O00370 CR382287.1-201ENST00000623954 586 ntBASIC15.98■□□□□ 0.15
O00370 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
O00370 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.98■□□□□ 0.15
O00370 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.98■□□□□ 0.15
O00370 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
O00370 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
O00370 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
O00370 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.98■□□□□ 0.15
O00370 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
O00370 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.98■□□□□ 0.15
O00370 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
O00370 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
O00370 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
O00370 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
O00370 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
O00370 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
O00370 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.98■□□□□ 0.15
O00370 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
O00370 INTS4P1-203ENST00000641008 3683 ntBASIC15.98■□□□□ 0.15
O00370 AC018442.1-201ENST00000421439 2061 ntBASIC15.98■□□□□ 0.15
O00370 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
O00370 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
O00370 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
O00370 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.98■□□□□ 0.15
O00370 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
O00370 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.97■□□□□ 0.15
O00370 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.97■□□□□ 0.15
O00370 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
O00370 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
O00370 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
O00370 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
O00370 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
O00370 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.97■□□□□ 0.15
O00370 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.97■□□□□ 0.15
O00370 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.97■□□□□ 0.15
O00370 AC016694.1-201ENST00000434179 700 ntBASIC15.97■□□□□ 0.15
O00370 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.97■□□□□ 0.15
O00370 KRT17P8-201ENST00000540749 863 ntBASIC15.97■□□□□ 0.15
O00370 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.97■□□□□ 0.15
O00370 KRT90P-201ENST00000549264 1064 ntBASIC15.97■□□□□ 0.15
O00370 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.97■□□□□ 0.15
O00370 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.97■□□□□ 0.15
O00370 AP001267.2-201ENST00000532619 2086 ntBASIC15.97■□□□□ 0.15
O00370 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.97■□□□□ 0.15
O00370 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
O00370 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.97■□□□□ 0.15
O00370 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
O00370 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
O00370 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
O00370 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
O00370 CLUHP2-201ENST00000426660 1303 ntBASIC15.96■□□□□ 0.15
O00370 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.96■□□□□ 0.15
O00370 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
O00370 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
O00370 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
O00370 AC041040.2-201ENST00000622926 2899 ntBASIC15.96■□□□□ 0.15
O00370 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
O00370 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
O00370 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
O00370 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
O00370 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.96■□□□□ 0.15
O00370 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
O00370 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
O00370 AC112492.5-201ENST00000421897 457 ntBASIC15.96■□□□□ 0.15
O00370 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.96■□□□□ 0.15
O00370 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
O00370 FAM197Y7-201ENST00000432892 766 ntBASIC15.96■□□□□ 0.15
O00370 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.96■□□□□ 0.15
O00370 AL590640.2-201ENST00000457038 527 ntBASIC15.96■□□□□ 0.15
O00370 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.96■□□□□ 0.15
O00370 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.96■□□□□ 0.15
O00370 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.96■□□□□ 0.15
O00370 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.96■□□□□ 0.15
O00370 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
O00370 ECM1P1-201ENST00000604092 1279 ntBASIC15.96■□□□□ 0.15
O00370 AC015656.1-201ENST00000624209 3578 ntBASIC15.96■□□□□ 0.15
O00370 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
O00370 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
O00370 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
O00370 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms