Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3B1O00203 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
AP3B1O00203 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3B1O00203 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.17■□□□□ 0.02
AP3B1O00203 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
AP3B1O00203 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.17■□□□□ 0.02
AP3B1O00203 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.17■□□□□ 0.02
AP3B1O00203 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3B1O00203 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3B1O00203 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP3B1O00203 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3B1O00203 KRT8P35-201ENST00000483942 1338 ntBASIC15.17■□□□□ 0.02
AP3B1O00203 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.16■□□□□ 0.02
AP3B1O00203 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.16■□□□□ 0.02
AP3B1O00203 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.16■□□□□ 0.02
AP3B1O00203 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
AP3B1O00203 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
AP3B1O00203 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
AP3B1O00203 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.16■□□□□ 0.02
AP3B1O00203 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
AP3B1O00203 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.16■□□□□ 0.02
AP3B1O00203 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.16■□□□□ 0.02
AP3B1O00203 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 EIF3FP3-201ENST00000434851 1086 ntBASIC15.16■□□□□ 0.02
AP3B1O00203 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.16■□□□□ 0.02
AP3B1O00203 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.16■□□□□ 0.02
AP3B1O00203 UGT1A2P-201ENST00000454886 866 ntBASIC15.16■□□□□ 0.02
AP3B1O00203 AC022137.2-201ENST00000503482 481 ntBASIC15.16■□□□□ 0.02
AP3B1O00203 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.16■□□□□ 0.02
AP3B1O00203 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
AP3B1O00203 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 AC005252.2-201ENST00000624630 1141 ntBASIC15.16■□□□□ 0.02
AP3B1O00203 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.16■□□□□ 0.02
AP3B1O00203 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.16■□□□□ 0.02
AP3B1O00203 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.16■□□□□ 0.02
AP3B1O00203 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.16■□□□□ 0.02
AP3B1O00203 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
AP3B1O00203 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.16■□□□□ 0.02
AP3B1O00203 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3B1O00203 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
AP3B1O00203 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
AP3B1O00203 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
AP3B1O00203 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 PIN1P1-201ENST00000412108 996 ntBASIC15.15■□□□□ 0.02
AP3B1O00203 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
AP3B1O00203 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP3B1O00203 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.15■□□□□ 0.02
AP3B1O00203 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
AP3B1O00203 CU634019.7-201ENST00000624153 1185 ntBASIC15.15■□□□□ 0.02
AP3B1O00203 FP236241.2-201ENST00000624906 1185 ntBASIC15.15■□□□□ 0.02
AP3B1O00203 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
AP3B1O00203 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
AP3B1O00203 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
AP3B1O00203 AC092135.3-201ENST00000624151 1846 ntBASIC15.15■□□□□ 0.02
AP3B1O00203 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms