Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 FGFR3P5-201ENST00000564496 886 ntBASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 SNORD3B-2-202ENST00000571722 791 ntBASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 MYO15B-237ENST00000642007 4893 ntBASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 RN7SKP214-201ENST00000364208 315 ntBASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 KLF2P1-201ENST00000447438 1042 ntBASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 NUP210P1-202ENST00000504322 710 ntBASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 AL161670.2-201ENST00000557650 1227 ntBASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 AC027601.3-201ENST00000622907 509 ntBASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3BA6NDS4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 AC134698.3-201ENST00000523880 214 ntBASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms