Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AC018529.2-202ENST00000611482 3087 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AL365209.1-201ENST00000624418 6473 ntBASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDHGA11Q9Y5H2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 RN7SL204P-201ENST00000582831 262 ntBASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 CHCHD2P3-201ENST00000603038 451 ntBASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGA11Q9Y5H2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 AL928921.2-201ENST00000641325 2442 ntBASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 AC098850.1-201ENST00000419919 790 ntBASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 AC022616.1-201ENST00000518688 554 ntBASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA11Q9Y5H2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms