Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 MIR770-201ENST00000390219 98 ntBASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 AC009118.2-201ENST00000613275 655 ntBASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 BX539320.1-201ENST00000623759 877 ntBASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 AC099521.3-201ENST00000624251 2938 ntBASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 C1QBPP1-201ENST00000400117 770 ntBASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 AP001582.1-201ENST00000525856 295 ntBASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 AC123567.1-201ENST00000548294 1261 ntBASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 AL359711.2-201ENST00000563105 872 ntBASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 AC093726.1-201ENST00000608064 963 ntBASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 AC007431.3-201ENST00000623221 587 ntBASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 PRSS30P-206ENST00000641773 873 ntBASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF11Q9Y3C5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
RNF11Q9Y3C5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF11Q9Y3C5 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms