Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RIMS3Q9UJD0 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIMS3Q9UJD0 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIMS3Q9UJD0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 AC111170.3-201ENST00000624282 2464 ntBASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 AL133267.1-201ENST00000398220 340 ntBASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 RPSAP43-201ENST00000402237 625 ntBASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 AL080243.2-201ENST00000418783 582 ntBASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 LINC00628-201ENST00000628516 1289 ntBASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RIMS3Q9UJD0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 UPF3AP3-201ENST00000420996 769 ntBASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 AP000347.1-202ENST00000435868 847 ntBASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 AC025048.3-201ENST00000590609 569 ntBASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 AC005702.4-201ENST00000618393 416 ntBASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIMS3Q9UJD0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.21□□□□□ -0.14
RIMS3Q9UJD0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
RIMS3Q9UJD0 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RIMS3Q9UJD0 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.21□□□□□ -0.14
RIMS3Q9UJD0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIMS3Q9UJD0 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.21□□□□□ -0.14
RIMS3Q9UJD0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIMS3Q9UJD0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RIMS3Q9UJD0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms