Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 AGGF1P1-201ENST00000509500 2073 ntBASIC18.71■□□□□ 0.59
SCN11AQ9UI33 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 AC126177.1-201ENST00000547829 2218 ntBASIC18.71■□□□□ 0.59
SCN11AQ9UI33 HLA-DMA-203ENST00000395305 777 ntBASIC18.71■□□□□ 0.59
SCN11AQ9UI33 ERP29P1-201ENST00000442902 706 ntBASIC18.71■□□□□ 0.59
SCN11AQ9UI33 RN7SL530P-201ENST00000485097 298 ntBASIC18.71■□□□□ 0.59
SCN11AQ9UI33 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 AIRN-201ENST00000601203 4374 ntBASIC18.71■□□□□ 0.59
SCN11AQ9UI33 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SCN11AQ9UI33 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SCN11AQ9UI33 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
SCN11AQ9UI33 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 ALG1L13P-202ENST00000519320 584 ntBASIC18.7■□□□□ 0.58
SCN11AQ9UI33 CMC2-204ENST00000562713 573 ntTSL 3 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 CMC2-209ENST00000565108 399 ntTSL 2 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 AL161773.1-201ENST00000624845 863 ntBASIC18.7■□□□□ 0.58
SCN11AQ9UI33 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 AC018529.2-202ENST00000611482 3087 ntBASIC18.7■□□□□ 0.58
SCN11AQ9UI33 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 AC018463.1-201ENST00000456674 917 ntBASIC18.7■□□□□ 0.58
SCN11AQ9UI33 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 AC026410.1-201ENST00000507366 1101 ntBASIC18.7■□□□□ 0.58
SCN11AQ9UI33 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 KLF17P1-201ENST00000547105 1126 ntBASIC18.7■□□□□ 0.58
SCN11AQ9UI33 CR383656.3-201ENST00000551315 183 ntBASIC18.7■□□□□ 0.58
SCN11AQ9UI33 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 MIR3180-2-201ENST00000581748 88 ntBASIC18.7■□□□□ 0.58
SCN11AQ9UI33 AL133467.4-201ENST00000602953 725 ntBASIC18.7■□□□□ 0.58
SCN11AQ9UI33 TP53-221ENST00000615910 1149 ntTSL 5 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 MYADML-201ENST00000474610 2147 ntBASIC18.7■□□□□ 0.58
SCN11AQ9UI33 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.7■□□□□ 0.58
SCN11AQ9UI33 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 GUSBP10-201ENST00000417412 665 ntBASIC18.69■□□□□ 0.58
SCN11AQ9UI33 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN11AQ9UI33 CCT8L1P-201ENST00000465400 1674 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms