Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 AC007787.1-201ENST00000588095 1583 ntBASIC12.74□□□□□ -0.37
CLN8Q9UBY8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 KRT8P35-201ENST00000483942 1338 ntBASIC12.74□□□□□ -0.37
CLN8Q9UBY8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 AC104457.1-201ENST00000401024 814 ntBASIC12.74□□□□□ -0.37
CLN8Q9UBY8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 ARSEP1-201ENST00000420443 635 ntBASIC12.74□□□□□ -0.37
CLN8Q9UBY8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 C2orf27AP3-201ENST00000434123 579 ntBASIC12.74□□□□□ -0.37
CLN8Q9UBY8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 AC114812.1-204ENST00000449669 728 ntBASIC12.74□□□□□ -0.37
CLN8Q9UBY8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 AL359881.2-201ENST00000602973 570 ntBASIC12.74□□□□□ -0.37
CLN8Q9UBY8 MIR6805-201ENST00000615055 62 ntBASIC12.74□□□□□ -0.37
CLN8Q9UBY8 AL354718.3-201ENST00000616414 581 ntBASIC12.74□□□□□ -0.37
CLN8Q9UBY8 CR382287.1-201ENST00000623954 586 ntBASIC12.74□□□□□ -0.37
CLN8Q9UBY8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 FGD5P1-202ENST00000614866 2498 ntBASIC12.74□□□□□ -0.37
CLN8Q9UBY8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 LRRC59-203ENST00000576448 1531 ntBASIC12.73□□□□□ -0.37
CLN8Q9UBY8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.73□□□□□ -0.37
CLN8Q9UBY8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 AL390755.1-201ENST00000623716 2027 ntBASIC12.73□□□□□ -0.37
CLN8Q9UBY8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 AC093525.8-201ENST00000624099 1342 ntBASIC12.73□□□□□ -0.37
CLN8Q9UBY8 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 AL512343.1-201ENST00000605837 169 ntBASIC12.73□□□□□ -0.37
CLN8Q9UBY8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.73□□□□□ -0.37
CLN8Q9UBY8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms