Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 AC245100.3-201ENST00000441281 285 ntBASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 GPR53P-205ENST00000457298 1084 ntBASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 ENPP7P14-201ENST00000621765 1040 ntBASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDHAF3Q9NRP4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 FTH1P14-201ENST00000482930 551 ntBASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 RNA5SP486-201ENST00000515961 83 ntBASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 ACE3P-201ENST00000423435 1973 ntBASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SDHAF3Q9NRP4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SDHAF3Q9NRP4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SDHAF3Q9NRP4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SDHAF3Q9NRP4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SDHAF3Q9NRP4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SDHAF3Q9NRP4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
SDHAF3Q9NRP4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SDHAF3Q9NRP4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SDHAF3Q9NRP4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SDHAF3Q9NRP4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SDHAF3Q9NRP4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SDHAF3Q9NRP4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SDHAF3Q9NRP4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms