Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 DGCR5-201ENST00000399539 862 ntBASIC14.31□□□□□ -0.12
BRF2Q9HAW0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 CRB3P1-201ENST00000449338 276 ntBASIC14.31□□□□□ -0.12
BRF2Q9HAW0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 MESTP3-201ENST00000503460 968 ntBASIC14.31□□□□□ -0.12
BRF2Q9HAW0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 RN7SL48P-201ENST00000579283 293 ntBASIC14.31□□□□□ -0.12
BRF2Q9HAW0 AC004466.1-201ENST00000599515 1080 ntBASIC14.31□□□□□ -0.12
BRF2Q9HAW0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 MRPL37P1-201ENST00000592451 1337 ntBASIC14.31□□□□□ -0.12
BRF2Q9HAW0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BRF2Q9HAW0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 GCOM2-201ENST00000509133 1104 ntBASIC14.3□□□□□ -0.12
BRF2Q9HAW0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 AC138696.2-201ENST00000607376 223 ntBASIC14.3□□□□□ -0.12
BRF2Q9HAW0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 AC145423.3-201ENST00000615987 467 ntBASIC14.3□□□□□ -0.12
BRF2Q9HAW0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms