Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 AL442647.2-201ENST00000429864 857 ntBASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 DFFBP1-201ENST00000433250 979 ntBASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 DUX4L47-201ENST00000566374 394 ntBASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 AL928921.2-201ENST00000641325 2442 ntBASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 MIR6799-201ENST00000620297 69 ntBASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 AC005252.2-201ENST00000624630 1141 ntBASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 HSPA7-201ENST00000445535 1927 ntBASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 AC055811.4-201ENST00000624039 1754 ntBASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPF3BQ9BZI7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 AC015802.1-201ENST00000588104 1449 ntBASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 KLF2P2-201ENST00000416807 1039 ntBASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 NUS1P3-201ENST00000423502 862 ntBASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 EIF3FP3-201ENST00000434851 1086 ntBASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 RN7SL692P-201ENST00000464677 288 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms