Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 AL031731.1-201ENST00000642131 2094 ntBASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 AC027237.1-201ENST00000560942 655 ntBASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 AC142086.5-202ENST00000562500 217 ntBASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 MIR4783-201ENST00000580343 82 ntBASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 AC004466.2-201ENST00000614749 516 ntBASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 MIR600HG-201ENST00000449175 5984 ntBASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CNTNAP3Q9BZ76 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 AC005052.1-201ENST00000625181 2492 ntBASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 HLA-A-202ENST00000376806 1854 ntBASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 KRT17P5-201ENST00000332088 839 ntBASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms