Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 KRT8P44-201ENST00000441609 1350 ntBASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 BRWD1P1-201ENST00000401091 371 ntBASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 AL355994.2-201ENST00000447882 704 ntBASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 AL583810.1-201ENST00000553344 1045 ntBASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 DUX4L45-201ENST00000566406 1057 ntBASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TUBB1P2-201ENST00000422712 1306 ntBASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TUBB1P1-201ENST00000503144 1300 ntBASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SSBP3Q9BWW4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 FAM8A4P-201ENST00000435433 1213 ntBASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 DUX4L47-201ENST00000566374 394 ntBASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms