Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.58□□□□□ -0.4
CCL13Q99616 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.58□□□□□ -0.4
CCL13Q99616 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.58□□□□□ -0.4
CCL13Q99616 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.58□□□□□ -0.4
CCL13Q99616 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL13Q99616 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.58□□□□□ -0.4
CCL13Q99616 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.58□□□□□ -0.4
CCL13Q99616 INTS4P1-203ENST00000641008 3683 ntBASIC12.58□□□□□ -0.4
CCL13Q99616 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CCL13Q99616 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCL13Q99616 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.4
CCL13Q99616 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL13Q99616 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL13Q99616 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CCL13Q99616 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CCL13Q99616 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.57□□□□□ -0.4
CCL13Q99616 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CCL13Q99616 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
CCL13Q99616 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 AC079776.1-201ENST00000401540 1152 ntBASIC12.57□□□□□ -0.4
CCL13Q99616 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.57□□□□□ -0.4
CCL13Q99616 BOLA2P3-201ENST00000404566 256 ntBASIC12.57□□□□□ -0.4
CCL13Q99616 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 KLF2P4-201ENST00000451959 1225 ntBASIC12.57□□□□□ -0.4
CCL13Q99616 CTBP2P5-201ENST00000454986 1264 ntBASIC12.57□□□□□ -0.4
CCL13Q99616 ACA64.2-201ENST00000459014 129 ntBASIC12.57□□□□□ -0.4
CCL13Q99616 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 RNA5SP486-201ENST00000515961 83 ntBASIC12.57□□□□□ -0.4
CCL13Q99616 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CCL13Q99616 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 KRT90P-201ENST00000549264 1064 ntBASIC12.57□□□□□ -0.4
CCL13Q99616 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.57□□□□□ -0.4
CCL13Q99616 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CCL13Q99616 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CCL13Q99616 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.57□□□□□ -0.4
CCL13Q99616 AC138951.2-201ENST00000623455 1161 ntBASIC12.57□□□□□ -0.4
CCL13Q99616 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CCL13Q99616 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CCL13Q99616 CICP23-201ENST00000605013 2741 ntBASIC12.57□□□□□ -0.4
CCL13Q99616 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CCL13Q99616 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
CCL13Q99616 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CCL13Q99616 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.57□□□□□ -0.4
CCL13Q99616 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CCL13Q99616 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL13Q99616 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL13Q99616 AC013726.1-201ENST00000563747 2285 ntBASIC12.57□□□□□ -0.4
CCL13Q99616 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CCL13Q99616 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL13Q99616 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 AC018529.2-202ENST00000611482 3087 ntBASIC12.56□□□□□ -0.4
CCL13Q99616 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms