Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 LINC01101-201ENST00000622953 1884 ntBASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 AL035414.1-201ENST00000451327 857 ntBASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 AC104306.2-201ENST00000451877 341 ntBASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 AC104640.1-201ENST00000562617 2109 ntBASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.51■□□□□ 0.07
CDK5RAP1Q96SZ6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 AC009093.2-202ENST00000620513 2079 ntBASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 TUBB8P8-201ENST00000458717 1058 ntBASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 DUX4L46-201ENST00000566845 751 ntBASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 AC243960.2-201ENST00000600996 747 ntBASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 AC006058.4-201ENST00000624016 1670 ntBASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDK5RAP1Q96SZ6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms