Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC004898.1-201ENST00000451057 766 ntBASIC16.11■□□□□ 0.17
SNX27Q96L92 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX27Q96L92 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.11■□□□□ 0.17
SNX27Q96L92 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.11■□□□□ 0.17
SNX27Q96L92 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.11■□□□□ 0.17
SNX27Q96L92 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.11■□□□□ 0.17
SNX27Q96L92 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.11■□□□□ 0.17
SNX27Q96L92 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.11■□□□□ 0.17
SNX27Q96L92 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX27Q96L92 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX27Q96L92 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SNX27Q96L92 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.11■□□□□ 0.17
SNX27Q96L92 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX27Q96L92 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SNX27Q96L92 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNX27Q96L92 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX27Q96L92 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SNX27Q96L92 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.11■□□□□ 0.17
SNX27Q96L92 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.11■□□□□ 0.17
SNX27Q96L92 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.11■□□□□ 0.17
SNX27Q96L92 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX27Q96L92 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNX27Q96L92 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.11■□□□□ 0.17
SNX27Q96L92 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.1■□□□□ 0.17
SNX27Q96L92 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SNX27Q96L92 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.1■□□□□ 0.17
SNX27Q96L92 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.1■□□□□ 0.17
SNX27Q96L92 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SNX27Q96L92 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
SNX27Q96L92 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.1■□□□□ 0.17
SNX27Q96L92 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SNX27Q96L92 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.1■□□□□ 0.17
SNX27Q96L92 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.1■□□□□ 0.17
SNX27Q96L92 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.1■□□□□ 0.17
SNX27Q96L92 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.1■□□□□ 0.17
SNX27Q96L92 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.1■□□□□ 0.17
SNX27Q96L92 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.1■□□□□ 0.17
SNX27Q96L92 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.1■□□□□ 0.17
SNX27Q96L92 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.1■□□□□ 0.17
SNX27Q96L92 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.1■□□□□ 0.17
SNX27Q96L92 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.1■□□□□ 0.17
SNX27Q96L92 AC007663.3-201ENST00000609632 465 ntBASIC16.1■□□□□ 0.17
SNX27Q96L92 BX088702.1-201ENST00000610784 235 ntBASIC16.1■□□□□ 0.17
SNX27Q96L92 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SNX27Q96L92 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SNX27Q96L92 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.1■□□□□ 0.17
SNX27Q96L92 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.1■□□□□ 0.17
SNX27Q96L92 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SNX27Q96L92 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX27Q96L92 E2F3P2-201ENST00000447755 1422 ntBASIC16.1■□□□□ 0.17
SNX27Q96L92 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SNX27Q96L92 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SNX27Q96L92 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SNX27Q96L92 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.09■□□□□ 0.17
SNX27Q96L92 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 AC006058.4-201ENST00000624016 1670 ntBASIC16.09■□□□□ 0.17
SNX27Q96L92 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.09■□□□□ 0.17
SNX27Q96L92 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.09■□□□□ 0.17
SNX27Q96L92 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.09■□□□□ 0.17
SNX27Q96L92 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.09■□□□□ 0.17
SNX27Q96L92 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.09■□□□□ 0.17
SNX27Q96L92 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.09■□□□□ 0.17
SNX27Q96L92 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.09■□□□□ 0.17
SNX27Q96L92 AC005077.2-201ENST00000449786 690 ntBASIC16.09■□□□□ 0.17
SNX27Q96L92 AKR7A2P1-201ENST00000460134 915 ntBASIC16.09■□□□□ 0.17
SNX27Q96L92 AC104784.1-201ENST00000473096 294 ntBASIC16.09■□□□□ 0.17
SNX27Q96L92 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.09■□□□□ 0.17
SNX27Q96L92 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC16.09■□□□□ 0.17
SNX27Q96L92 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.09■□□□□ 0.17
SNX27Q96L92 AL162426.1-201ENST00000624141 743 ntBASIC16.09■□□□□ 0.17
SNX27Q96L92 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.09■□□□□ 0.17
SNX27Q96L92 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.09■□□□□ 0.17
SNX27Q96L92 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX27Q96L92 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms