Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.96■□□□□ 0.31
SMARCE1Q969G3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.96■□□□□ 0.31
SMARCE1Q969G3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMARCE1Q969G3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.96■□□□□ 0.31
SMARCE1Q969G3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMARCE1Q969G3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SMARCE1Q969G3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SMARCE1Q969G3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SMARCE1Q969G3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SMARCE1Q969G3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMARCE1Q969G3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMARCE1Q969G3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMARCE1Q969G3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.96■□□□□ 0.3
SMARCE1Q969G3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMARCE1Q969G3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
SMARCE1Q969G3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMARCE1Q969G3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMARCE1Q969G3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.96■□□□□ 0.3
SMARCE1Q969G3 KRT18P28-201ENST00000453838 1332 ntBASIC16.96■□□□□ 0.3
SMARCE1Q969G3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMARCE1Q969G3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.95■□□□□ 0.3
SMARCE1Q969G3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 TPT1P11-201ENST00000458482 498 ntBASIC16.95■□□□□ 0.3
SMARCE1Q969G3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 AC104794.3-201ENST00000566840 1248 ntBASIC16.95■□□□□ 0.3
SMARCE1Q969G3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.95■□□□□ 0.3
SMARCE1Q969G3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.95■□□□□ 0.3
SMARCE1Q969G3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 VDAC1P7-201ENST00000462417 847 ntBASIC16.94■□□□□ 0.3
SMARCE1Q969G3 RN7SL399P-201ENST00000471648 279 ntBASIC16.94■□□□□ 0.3
SMARCE1Q969G3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 AL662799.1-202ENST00000614205 422 ntBASIC16.94■□□□□ 0.3
SMARCE1Q969G3 AC023511.2-201ENST00000618803 211 ntBASIC16.94■□□□□ 0.3
SMARCE1Q969G3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SMARCE1Q969G3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms