Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ZNF248Q8NDW4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 KRT8P14-201ENST00000414254 1442 ntBASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 ACTG1P2-201ENST00000415776 1125 ntBASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AL355334.1-201ENST00000417713 215 ntBASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 ACTG1P11-201ENST00000425411 1125 ntBASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AC114501.1-201ENST00000445949 172 ntBASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AL353637.1-201ENST00000451571 732 ntBASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AC004066.1-201ENST00000502488 802 ntBASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AC100850.1-201ENST00000506768 649 ntBASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 RN7SL555P-201ENST00000584742 339 ntBASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AL136295.7-201ENST00000619226 1200 ntBASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 COX6A1P2-201ENST00000620597 330 ntBASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AC022748.3-201ENST00000621828 275 ntBASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ZNF248Q8NDW4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 AL136309.1-201ENST00000403917 691 ntBASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 CHMP1AP1-201ENST00000445563 662 ntBASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 TUBB8P8-201ENST00000458717 1058 ntBASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 PGAM1P5-201ENST00000548011 764 ntBASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 AC025181.2-201ENST00000606994 802 ntBASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 HLA-C-210ENST00000640219 976 ntBASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 AC004923.1-202ENST00000642106 209 ntBASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF248Q8NDW4 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms