Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.66■□□□□ 0.26
TRIM50Q86XT4 AC004899.1-201ENST00000424687 1714 ntBASIC16.66■□□□□ 0.26
TRIM50Q86XT4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 AC104073.2-201ENST00000453737 312 ntBASIC16.66■□□□□ 0.26
TRIM50Q86XT4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 AC005740.2-201ENST00000511085 419 ntBASIC16.66■□□□□ 0.26
TRIM50Q86XT4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 AC022217.1-201ENST00000521069 738 ntBASIC16.66■□□□□ 0.26
TRIM50Q86XT4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 AC100827.2-201ENST00000563214 1194 ntBASIC16.66■□□□□ 0.26
TRIM50Q86XT4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 BNIP3P13-201ENST00000599968 566 ntBASIC16.66■□□□□ 0.26
TRIM50Q86XT4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.66■□□□□ 0.26
TRIM50Q86XT4 TSPY26P-202ENST00000565928 3884 ntBASIC16.66■□□□□ 0.26
TRIM50Q86XT4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 AC013726.1-201ENST00000563747 2285 ntBASIC16.65■□□□□ 0.26
TRIM50Q86XT4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 AC073347.1-201ENST00000421633 2643 ntBASIC16.65■□□□□ 0.26
TRIM50Q86XT4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 AC010141.1-201ENST00000411585 623 ntBASIC16.65■□□□□ 0.26
TRIM50Q86XT4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 KLF2P1-201ENST00000447438 1042 ntBASIC16.65■□□□□ 0.26
TRIM50Q86XT4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 RNA5SP423-201ENST00000517127 109 ntBASIC16.65■□□□□ 0.26
TRIM50Q86XT4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 AC013355.1-201ENST00000562625 723 ntBASIC16.65■□□□□ 0.26
TRIM50Q86XT4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 AL645939.5-201ENST00000606834 243 ntBASIC16.65■□□□□ 0.26
TRIM50Q86XT4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 AC105917.1-201ENST00000506637 2539 ntBASIC16.65■□□□□ 0.26
TRIM50Q86XT4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM50Q86XT4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM50Q86XT4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM50Q86XT4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM50Q86XT4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 ACTG1P2-201ENST00000415776 1125 ntBASIC16.64■□□□□ 0.25
TRIM50Q86XT4 ACTG1P11-201ENST00000425411 1125 ntBASIC16.64■□□□□ 0.25
TRIM50Q86XT4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 CHMP4BP1-201ENST00000556017 588 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms