Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.77■□□□□ 0.44
CTR9Q6PD62 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.77■□□□□ 0.44
CTR9Q6PD62 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.77■□□□□ 0.44
CTR9Q6PD62 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
CTR9Q6PD62 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 MIR663B-201ENST00000408361 115 ntBASIC17.77■□□□□ 0.44
CTR9Q6PD62 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.77■□□□□ 0.44
CTR9Q6PD62 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.77■□□□□ 0.44
CTR9Q6PD62 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.77■□□□□ 0.44
CTR9Q6PD62 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.77■□□□□ 0.44
CTR9Q6PD62 GPR182-203ENST00000622922 591 ntBASIC17.77■□□□□ 0.44
CTR9Q6PD62 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.77■□□□□ 0.44
CTR9Q6PD62 AC002472.3-201ENST00000640124 621 ntBASIC17.77■□□□□ 0.44
CTR9Q6PD62 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.77■□□□□ 0.44
CTR9Q6PD62 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTR9Q6PD62 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTR9Q6PD62 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.77■□□□□ 0.43
CTR9Q6PD62 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTR9Q6PD62 AC018735.1-201ENST00000437208 1502 ntBASIC17.77■□□□□ 0.43
CTR9Q6PD62 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.77■□□□□ 0.43
CTR9Q6PD62 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CTR9Q6PD62 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTR9Q6PD62 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTR9Q6PD62 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.77■□□□□ 0.43
CTR9Q6PD62 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTR9Q6PD62 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 SALL4P5-201ENST00000419001 1760 ntBASIC17.76■□□□□ 0.43
CTR9Q6PD62 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 TLE1P1-201ENST00000422965 589 ntBASIC17.76■□□□□ 0.43
CTR9Q6PD62 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 AC104306.2-201ENST00000451877 341 ntBASIC17.76■□□□□ 0.43
CTR9Q6PD62 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 AC104982.3-201ENST00000581995 514 ntBASIC17.76■□□□□ 0.43
CTR9Q6PD62 AL118558.3-201ENST00000607414 1079 ntBASIC17.76■□□□□ 0.43
CTR9Q6PD62 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTR9Q6PD62 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.76■□□□□ 0.43
CTR9Q6PD62 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.75■□□□□ 0.43
CTR9Q6PD62 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.75■□□□□ 0.43
CTR9Q6PD62 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.75■□□□□ 0.43
CTR9Q6PD62 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.75■□□□□ 0.43
CTR9Q6PD62 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.75■□□□□ 0.43
CTR9Q6PD62 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.75■□□□□ 0.43
CTR9Q6PD62 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.75■□□□□ 0.43
CTR9Q6PD62 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.75■□□□□ 0.43
CTR9Q6PD62 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.75■□□□□ 0.43
CTR9Q6PD62 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.75■□□□□ 0.43
CTR9Q6PD62 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTR9Q6PD62 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CTR9Q6PD62 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms