Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 MIR658-201ENST00000385210 100 ntBASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 CNN2P8-201ENST00000421872 913 ntBASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 CTBP2P5-201ENST00000454986 1264 ntBASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 RHOXF1P1-202ENST00000635473 501 ntBASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC39BQ5VTQ0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.1
TTC39BQ5VTQ0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.64■□□□□ 0.1
TTC39BQ5VTQ0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TTC39BQ5VTQ0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 REXO1L2P-201ENST00000425429 2069 ntBASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 CD8B2-202ENST00000417670 633 ntBASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 AC244107.1-201ENST00000442033 332 ntBASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 KRT223P-202ENST00000449164 1292 ntBASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 FO681548.1-201ENST00000455617 1132 ntBASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 DUX4L47-201ENST00000566374 394 ntBASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 COX11-210ENST00000639671 696 ntBASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TTC39BQ5VTQ0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.63■□□□□ 0.09
TTC39BQ5VTQ0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC39BQ5VTQ0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TTC39BQ5VTQ0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TTC39BQ5VTQ0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TTC39BQ5VTQ0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.63■□□□□ 0.09
TTC39BQ5VTQ0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.63■□□□□ 0.09
TTC39BQ5VTQ0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC39BQ5VTQ0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC39BQ5VTQ0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.63■□□□□ 0.09
TTC39BQ5VTQ0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
TTC39BQ5VTQ0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TTC39BQ5VTQ0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC39BQ5VTQ0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms