Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 YBX1P5-201ENST00000509441 847 ntBASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 MIR4469-201ENST00000583919 79 ntBASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 AL691403.2-201ENST00000618460 490 ntBASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 AC139530.3-201ENST00000620344 690 ntBASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 AC023794.5-201ENST00000564380 2157 ntBASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD55Q3KP44 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 SPDYE11-202ENST00000450699 704 ntBASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 AP000344.2-201ENST00000512987 629 ntBASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 SLC25A39P2-201ENST00000537614 270 ntBASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 AC105021.1-202ENST00000570572 669 ntBASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 SPDYE9P-201ENST00000570642 692 ntBASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 SPDYE10P-202ENST00000612005 668 ntBASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 SPDYE8P-202ENST00000612377 668 ntBASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 AL360270.3-201ENST00000609118 1348 ntBASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
ANKRD55Q3KP44 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 380.9 ms