Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCDH1Q08174 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDH1Q08174 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PCDH1Q08174 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
PCDH1Q08174 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDH1Q08174 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCDH1Q08174 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDH1Q08174 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
PCDH1Q08174 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCDH1Q08174 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PCDH1Q08174 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDH1Q08174 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCDH1Q08174 AL138709.1-201ENST00000614840 1693 ntBASIC14.46□□□□□ -0.09
PCDH1Q08174 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PCDH1Q08174 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCDH1Q08174 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PCDH1Q08174 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PCDH1Q08174 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PCDH1Q08174 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDH1Q08174 POM121L8P-201ENST00000417732 1281 ntBASIC14.46□□□□□ -0.09
PCDH1Q08174 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 POM121L9P-203ENST00000441984 1285 ntBASIC14.46□□□□□ -0.09
PCDH1Q08174 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDH1Q08174 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PCDH1Q08174 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDH1Q08174 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDH1Q08174 MIR5189-201ENST00000577370 114 ntBASIC14.46□□□□□ -0.09
PCDH1Q08174 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDH1Q08174 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDH1Q08174 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDH1Q08174 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDH1Q08174 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDH1Q08174 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDH1Q08174 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
PCDH1Q08174 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.46□□□□□ -0.1
PCDH1Q08174 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.46□□□□□ -0.1
PCDH1Q08174 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.46□□□□□ -0.1
PCDH1Q08174 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PCDH1Q08174 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDH1Q08174 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.46□□□□□ -0.1
PCDH1Q08174 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.46□□□□□ -0.1
PCDH1Q08174 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDH1Q08174 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PCDH1Q08174 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PCDH1Q08174 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PCDH1Q08174 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDH1Q08174 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 AGGF1P1-201ENST00000509500 2073 ntBASIC14.45□□□□□ -0.1
PCDH1Q08174 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
PCDH1Q08174 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 RN7SKP230-201ENST00000365642 335 ntBASIC14.45□□□□□ -0.1
PCDH1Q08174 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.45□□□□□ -0.1
PCDH1Q08174 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.45□□□□□ -0.1
PCDH1Q08174 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.45□□□□□ -0.1
PCDH1Q08174 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDH1Q08174 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 AC245100.3-201ENST00000441281 285 ntBASIC14.45□□□□□ -0.1
PCDH1Q08174 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDH1Q08174 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
PCDH1Q08174 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.45□□□□□ -0.1
PCDH1Q08174 ALG3P1-201ENST00000508806 1114 ntBASIC14.45□□□□□ -0.1
PCDH1Q08174 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PCDH1Q08174 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.45□□□□□ -0.1
PCDH1Q08174 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.45□□□□□ -0.1
PCDH1Q08174 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 PTP4A1P2-201ENST00000546033 454 ntBASIC14.45□□□□□ -0.1
PCDH1Q08174 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms