Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 KRT8P22-201ENST00000562317 1415 ntBASIC14.49□□□□□ -0.09
HMGCS1Q01581 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 HSPA7-201ENST00000445535 1927 ntBASIC14.49□□□□□ -0.09
HMGCS1Q01581 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 FAM207CP-201ENST00000443486 507 ntBASIC14.48□□□□□ -0.09
HMGCS1Q01581 SERBP1P5-201ENST00000510079 1181 ntBASIC14.48□□□□□ -0.09
HMGCS1Q01581 AC123567.1-201ENST00000548294 1261 ntBASIC14.48□□□□□ -0.09
HMGCS1Q01581 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 AC124283.3-201ENST00000570869 594 ntBASIC14.48□□□□□ -0.09
HMGCS1Q01581 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 AC092364.2-202ENST00000597012 1073 ntBASIC14.48□□□□□ -0.09
HMGCS1Q01581 AC093726.1-201ENST00000608064 963 ntBASIC14.48□□□□□ -0.09
HMGCS1Q01581 AC009118.2-201ENST00000613275 655 ntBASIC14.48□□□□□ -0.09
HMGCS1Q01581 AC008761.3-201ENST00000624803 892 ntBASIC14.48□□□□□ -0.09
HMGCS1Q01581 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 GRK6P1-201ENST00000400595 1711 ntBASIC14.48□□□□□ -0.09
HMGCS1Q01581 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCS1Q01581 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HMGCS1Q01581 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 AC005840.4-201ENST00000541242 2494 ntBASIC14.47□□□□□ -0.09
HMGCS1Q01581 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 MIR661-201ENST00000384842 89 ntBASIC14.47□□□□□ -0.09
HMGCS1Q01581 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 AL442647.2-201ENST00000429864 857 ntBASIC14.47□□□□□ -0.09
HMGCS1Q01581 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGCS1Q01581 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 AC026434.2-201ENST00000506094 1078 ntBASIC14.47□□□□□ -0.09
HMGCS1Q01581 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 AC022447.6-201ENST00000515522 438 ntBASIC14.47□□□□□ -0.09
HMGCS1Q01581 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 AC092552.1-201ENST00000547243 906 ntBASIC14.47□□□□□ -0.09
HMGCS1Q01581 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.47□□□□□ -0.09
HMGCS1Q01581 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms