Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.89■□□□□ 0.29
CCNA1P78396 WASH3P-207ENST00000560956 1394 ntBASIC16.89■□□□□ 0.29
CCNA1P78396 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.89■□□□□ 0.29
CCNA1P78396 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCNA1P78396 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCNA1P78396 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.88■□□□□ 0.29
CCNA1P78396 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.88■□□□□ 0.29
CCNA1P78396 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.88■□□□□ 0.29
CCNA1P78396 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.88■□□□□ 0.29
CCNA1P78396 XBP1P1-201ENST00000436573 652 ntBASIC16.88■□□□□ 0.29
CCNA1P78396 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.88■□□□□ 0.29
CCNA1P78396 AC079112.1-201ENST00000454972 939 ntBASIC16.88■□□□□ 0.29
CCNA1P78396 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 AC130709.1-201ENST00000484779 1212 ntBASIC16.88■□□□□ 0.29
CCNA1P78396 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.88■□□□□ 0.29
CCNA1P78396 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.88■□□□□ 0.29
CCNA1P78396 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.88■□□□□ 0.29
CCNA1P78396 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 AC135983.4-201ENST00000564116 1262 ntBASIC16.88■□□□□ 0.29
CCNA1P78396 PHBP15-201ENST00000574228 665 ntBASIC16.88■□□□□ 0.29
CCNA1P78396 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.88■□□□□ 0.29
CCNA1P78396 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.88■□□□□ 0.29
CCNA1P78396 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.88■□□□□ 0.29
CCNA1P78396 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.88■□□□□ 0.29
CCNA1P78396 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
CCNA1P78396 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCNA1P78396 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.88■□□□□ 0.29
CCNA1P78396 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.88■□□□□ 0.29
CCNA1P78396 KRT18P9-201ENST00000604826 1300 ntBASIC16.88■□□□□ 0.29
CCNA1P78396 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 AL391005.1-201ENST00000623953 2435 ntBASIC16.88■□□□□ 0.29
CCNA1P78396 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.88■□□□□ 0.29
CCNA1P78396 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.88■□□□□ 0.29
CCNA1P78396 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCNA1P78396 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNA1P78396 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.87■□□□□ 0.29
CCNA1P78396 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
CCNA1P78396 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 MROH4P-201ENST00000431302 1578 ntBASIC16.87■□□□□ 0.29
CCNA1P78396 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 DOC2GP-204ENST00000639052 2548 ntBASIC16.87■□□□□ 0.29
CCNA1P78396 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
CCNA1P78396 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCNA1P78396 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCNA1P78396 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCNA1P78396 AP000358.1-201ENST00000456260 156 ntBASIC16.87■□□□□ 0.29
CCNA1P78396 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.87■□□□□ 0.29
CCNA1P78396 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.87■□□□□ 0.29
CCNA1P78396 DNM1P30-201ENST00000563586 452 ntBASIC16.87■□□□□ 0.29
CCNA1P78396 AC093752.3-201ENST00000567343 901 ntBASIC16.87■□□□□ 0.29
CCNA1P78396 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.87■□□□□ 0.29
CCNA1P78396 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CCNA1P78396 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CCNA1P78396 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCNA1P78396 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.87■□□□□ 0.29
CCNA1P78396 MEG3_2.1-201ENST00000611456 105 ntBASIC16.87■□□□□ 0.29
CCNA1P78396 AC242376.2-201ENST00000619355 883 ntBASIC16.87■□□□□ 0.29
CCNA1P78396 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.87■□□□□ 0.29
CCNA1P78396 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCNA1P78396 AHCYP4-201ENST00000419201 1315 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms