Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SNRPFP62306 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
SNRPFP62306 KHSRPP1-201ENST00000427983 1768 ntBASIC16.21■□□□□ 0.18
SNRPFP62306 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.2■□□□□ 0.18
SNRPFP62306 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SNRPFP62306 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SNRPFP62306 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.2■□□□□ 0.18
SNRPFP62306 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 AC010141.1-201ENST00000411585 623 ntBASIC16.2■□□□□ 0.18
SNRPFP62306 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.2■□□□□ 0.18
SNRPFP62306 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
SNRPFP62306 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.2■□□□□ 0.18
SNRPFP62306 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.2■□□□□ 0.18
SNRPFP62306 HOMER2P2-201ENST00000451621 847 ntBASIC16.2■□□□□ 0.18
SNRPFP62306 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.2■□□□□ 0.18
SNRPFP62306 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.2■□□□□ 0.18
SNRPFP62306 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.2■□□□□ 0.18
SNRPFP62306 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.2■□□□□ 0.18
SNRPFP62306 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.2■□□□□ 0.18
SNRPFP62306 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.2■□□□□ 0.18
SNRPFP62306 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.2■□□□□ 0.18
SNRPFP62306 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.2■□□□□ 0.18
SNRPFP62306 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.2■□□□□ 0.18
SNRPFP62306 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SNRPFP62306 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SNRPFP62306 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.2■□□□□ 0.18
SNRPFP62306 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNRPFP62306 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.2■□□□□ 0.18
SNRPFP62306 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.19■□□□□ 0.18
SNRPFP62306 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.19■□□□□ 0.18
SNRPFP62306 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.19■□□□□ 0.18
SNRPFP62306 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SNRPFP62306 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SNRPFP62306 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SNRPFP62306 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SNRPFP62306 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.19■□□□□ 0.18
SNRPFP62306 AC026954.1-201ENST00000429771 1293 ntBASIC16.19■□□□□ 0.18
SNRPFP62306 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.19■□□□□ 0.18
SNRPFP62306 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.19■□□□□ 0.18
SNRPFP62306 DUX4L45-201ENST00000566406 1057 ntBASIC16.19■□□□□ 0.18
SNRPFP62306 PPY2P-201ENST00000582808 702 ntBASIC16.19■□□□□ 0.18
SNRPFP62306 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.19■□□□□ 0.18
SNRPFP62306 AL358472.3-201ENST00000608147 415 ntBASIC16.19■□□□□ 0.18
SNRPFP62306 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.19■□□□□ 0.18
SNRPFP62306 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SNRPFP62306 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SNRPFP62306 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SNRPFP62306 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.19■□□□□ 0.18
SNRPFP62306 AC015688.4-201ENST00000580780 1647 ntBASIC16.19■□□□□ 0.18
SNRPFP62306 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.19■□□□□ 0.18
SNRPFP62306 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRPFP62306 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
SNRPFP62306 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRPFP62306 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SNRPFP62306 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SNRPFP62306 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SNRPFP62306 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
SNRPFP62306 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms