Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLRN1P58418 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLRN1P58418 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLRN1P58418 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLRN1P58418 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.45□□□□□ -0.26
CLRN1P58418 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLRN1P58418 AC018665.1-201ENST00000622927 1362 ntBASIC13.45□□□□□ -0.26
CLRN1P58418 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 LINC00552-201ENST00000625151 2579 ntBASIC13.44□□□□□ -0.26
CLRN1P58418 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 MTHFR-210ENST00000641407 2387 ntBASIC13.44□□□□□ -0.26
CLRN1P58418 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.44□□□□□ -0.26
CLRN1P58418 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.44□□□□□ -0.26
CLRN1P58418 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.44□□□□□ -0.26
CLRN1P58418 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.44□□□□□ -0.26
CLRN1P58418 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.44□□□□□ -0.26
CLRN1P58418 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CLRN1P58418 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.44□□□□□ -0.26
CLRN1P58418 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.44□□□□□ -0.26
CLRN1P58418 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.44□□□□□ -0.26
CLRN1P58418 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CLRN1P58418 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.44□□□□□ -0.26
CLRN1P58418 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.44□□□□□ -0.26
CLRN1P58418 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CLRN1P58418 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLRN1P58418 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.44□□□□□ -0.26
CLRN1P58418 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CLRN1P58418 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CLRN1P58418 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CLRN1P58418 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CLRN1P58418 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.43□□□□□ -0.26
CLRN1P58418 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CLRN1P58418 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.43□□□□□ -0.26
CLRN1P58418 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.43□□□□□ -0.26
CLRN1P58418 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.43□□□□□ -0.26
CLRN1P58418 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.43□□□□□ -0.26
CLRN1P58418 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.43□□□□□ -0.26
CLRN1P58418 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.43□□□□□ -0.26
CLRN1P58418 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.43□□□□□ -0.26
CLRN1P58418 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.43□□□□□ -0.26
CLRN1P58418 AC009486.1-201ENST00000569860 813 ntBASIC13.43□□□□□ -0.26
CLRN1P58418 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.43□□□□□ -0.26
CLRN1P58418 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
CLRN1P58418 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.43□□□□□ -0.26
CLRN1P58418 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.43□□□□□ -0.26
CLRN1P58418 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.43□□□□□ -0.26
CLRN1P58418 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.43□□□□□ -0.26
CLRN1P58418 AL603764.1-201ENST00000636452 321 ntBASIC13.43□□□□□ -0.26
CLRN1P58418 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CLRN1P58418 AC023090.2-201ENST00000625182 2110 ntBASIC13.43□□□□□ -0.26
CLRN1P58418 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.43□□□□□ -0.26
CLRN1P58418 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.43□□□□□ -0.26
CLRN1P58418 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.43□□□□□ -0.26
CLRN1P58418 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CLRN1P58418 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLRN1P58418 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CLRN1P58418 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms