Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.54□□□□□ -0.24
SUMO3P55854 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SUMO3P55854 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SUMO3P55854 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SUMO3P55854 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.54□□□□□ -0.24
SUMO3P55854 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.54□□□□□ -0.24
SUMO3P55854 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.54□□□□□ -0.24
SUMO3P55854 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.54□□□□□ -0.24
SUMO3P55854 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SUMO3P55854 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.53□□□□□ -0.24
SUMO3P55854 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SUMO3P55854 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SUMO3P55854 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.53□□□□□ -0.24
SUMO3P55854 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SUMO3P55854 AL354702.1-201ENST00000442006 1960 ntBASIC13.53□□□□□ -0.24
SUMO3P55854 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
SUMO3P55854 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 MIR1202-201ENST00000408529 83 ntBASIC13.53□□□□□ -0.24
SUMO3P55854 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
SUMO3P55854 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.53□□□□□ -0.24
SUMO3P55854 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.53□□□□□ -0.24
SUMO3P55854 AC022447.6-201ENST00000515522 438 ntBASIC13.53□□□□□ -0.24
SUMO3P55854 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.53□□□□□ -0.24
SUMO3P55854 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.53□□□□□ -0.24
SUMO3P55854 AP003171.2-201ENST00000528208 925 ntBASIC13.53□□□□□ -0.24
SUMO3P55854 C2orf69P2-201ENST00000562032 1123 ntBASIC13.53□□□□□ -0.24
SUMO3P55854 AP005482.1-201ENST00000563722 1273 ntBASIC13.53□□□□□ -0.24
SUMO3P55854 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.53□□□□□ -0.24
SUMO3P55854 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.53□□□□□ -0.24
SUMO3P55854 AC008825.2-201ENST00000603374 718 ntBASIC13.53□□□□□ -0.24
SUMO3P55854 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.53□□□□□ -0.24
SUMO3P55854 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.53□□□□□ -0.24
SUMO3P55854 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
SUMO3P55854 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
SUMO3P55854 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO3P55854 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SUMO3P55854 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SUMO3P55854 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
SUMO3P55854 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.52□□□□□ -0.24
SUMO3P55854 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.52□□□□□ -0.24
SUMO3P55854 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SUMO3P55854 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SUMO3P55854 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SUMO3P55854 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
SUMO3P55854 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SUMO3P55854 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SUMO3P55854 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
SUMO3P55854 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
SUMO3P55854 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
SUMO3P55854 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SUMO3P55854 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.52□□□□□ -0.25
SUMO3P55854 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.52□□□□□ -0.25
SUMO3P55854 PUDPP3-201ENST00000445368 636 ntBASIC13.52□□□□□ -0.25
SUMO3P55854 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SUMO3P55854 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.52□□□□□ -0.25
SUMO3P55854 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SUMO3P55854 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.52□□□□□ -0.25
SUMO3P55854 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.52□□□□□ -0.25
SUMO3P55854 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.52□□□□□ -0.25
SUMO3P55854 AC073413.1-201ENST00000603927 732 ntBASIC13.52□□□□□ -0.25
SUMO3P55854 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.52□□□□□ -0.25
SUMO3P55854 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SUMO3P55854 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SUMO3P55854 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.52□□□□□ -0.25
SUMO3P55854 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SUMO3P55854 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.52□□□□□ -0.25
SUMO3P55854 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SUMO3P55854 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SUMO3P55854 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SUMO3P55854 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SUMO3P55854 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SUMO3P55854 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SUMO3P55854 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SUMO3P55854 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.52□□□□□ -0.25
SUMO3P55854 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SUMO3P55854 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SUMO3P55854 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms